 |
Job Description | P0ACD2 | Confidence | 99.92% | Date | Thu Jan 5 11:17:56 GMT 2012 |
Rank | 23 | Aligned Residues | 139 |
% Identity | 18% | Template | c3ixcA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:hexapeptide transferase family protein; |
PDBTitle: crystal structure of hexapeptide transferase family protein from2 anaplasma phagocytophilum
|
Resolution | 1.61 Å |
|
 |
  |   |
42 | . | . | . | . | . | . | . | 50 | . | |
|
. | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | |
. | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | |
|
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
| . | . |
|  |  |
|
|
|
|  |  |
|
|
|  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|  |  |
|
|
|  |  |  |
|
| . |
|
|  |  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |  |
|
|
|  |  |
|
|
|
| . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
Query Sequence |   |
W | R | A | F | L | L | R | L | F | G | . |
. |
A | K | I | G | K | N | V | V | I | R | P | S | V | K | I | T | Y | P | W | K | L | T | L | G | D | Y | A | W | V | G | D | D | V | N | L | Y | T | . |
L | G | E | I | T | I | G | A | H | S | V | I | S | Q | K | S | Y | L | C | T | G | S | H | D | H | A | S | Q | . |
. |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
| . | . |   |   |
|
|   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |
|   |
|
|   |   |   |   |
|
|   |   |   |   |
|   |   | . |   |   |   |
|   |
|
|   |   |   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
Template Conservation |   |
  |
|   |   |   |   |   |   |   |
|   |   |
|   |
|
|   |   |   |   |
|   |
|   |
|   |
|   | . | . |
|   |
|   |
|
|   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
M | R | E | V | L | V | P | Y | A | G | V | S | P | S | V | D | S | T | A | F | I | A | G | N | A | R | I | I | . |
. |
G | D | V | C | I | G | K | N | A | S | I | W | Y | G | T | V | L | R | G | D | V | D | K | I | E | V | G | E | G | T | N | I | Q | D | N | T | V | V | H | T | G | D | T | V | I | G | K | F | V | T |
Template Known Secondary structure |   |
| T | T | T |  |  |
| B | T | T | B |
|
|  |  |
| T | T | S |  |  |
| T | T |
|  |  |  | . | . |  |  |  |  |  |
| T | T |
|  |  |
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |
| T | T |
|  |  |
| T | T |
|  |  |
|
|
|
|  |  |  |
| T | T |
|  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |
|
|
|
|  |  |
|
|
|
|  |  |  | . | . |
|
|  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | |
|
. | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
  |
  |   |
|
117 | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | |
|
. | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . |
Predicted Secondary structure |   |
. |
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|  |  |
| . | . |
|  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |
|
|
|
|
|
|
|
|
Query SS confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
H | F | T | I | N | A | T | P | I | V | I | G | E | K | C | W | L | A | T | D | V | F | V | A | P | G | V | T | I | G | D | G | T | V | V | G | A | R | S | S | V | F | . |
. |
K | S | L | P | A | N | V | V | C | R | G | N | P | A | V | V | I | R | E | R | V | E | T | E |
Query Conservation |   |
. |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |
|
|   |   |   |   |
|   |   |
|
|   |
|
|   |   |   |
|
|
|
|
|
|
|
|   | . | . |   |
|
|
|   |   |
|
|
|   |
|   |
|
|
|   |
|   |   |
|   |   |   |   |
Alig confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|
|   |   |   |   |
|   |   |   |   |   |
|
|   |   |   |   |
|
|   |
|
|
|
|   |   |   |   |   |
|   |   |   |   |
|
|   |
|   |
|
|
|   |
|   |   |   |   |   |   |   |
Template Sequence |   |
I | G | H | S | C | I | L | H | A | C | T | L | G | N | N | A | F | V | G | M | G | S | I | V | M | D | R | A | V | M | E | E | G | S | M | L | A | A | G | S | L | L | T | R | G | K | I | V | K | S | G | E | L | W | A | G | R | P | A | K | F | L | R | M | M | T | E | E | E |
Template Known Secondary structure |   |
 |
| T | T |
|  |  |
| S |
|  |  |
| T | T |
|  |  |
| T | T |
|  |  |
| T | T |
|  |  |
| T | T |
|  |  |
| T | T |
|  |  |
| T | T |
|  |  |
| T | T |  |  |  |  |  | T | T |  |  |  |  |  |  |
|
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|