Job Description P0ACD2 Confidence 99.94% Date Thu Jan 5 11:17:56 GMT 2012 Rank 15 Aligned Residues 127 % Identity 22% Template c3i3aC_ PDB info PDB header:transferase Chain: C: PDB Molecule:acyl-[acyl-carrier-protein]--udp-n- PDBTitle: structural basis for the sugar nucleotide and acyl chain2 selectivity of leptospira interrogans lpxa Resolution 2.12 Å

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.																														90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	G	A	K	I	G	K	N	V	V	I	R	P	S	V	K	I	T	Y	P	W	K	L	T	L	G	D	Y	A	W	V	G	D	D	V	N	L	Y	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	I	T	I	G	A	H	S	V	I
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.
Template Sequence		P	K	A	E	L	H	E	S	V	E	V	G	P	Y	S	I	I	.	.	E	G	N	V	S	I	Q	E	G	T	I	I	E	G	H	V	K	I	C	A	G	S	E	I	G	K	F	N	R	F	H	Q	G	A	V	I	G	V	M	P	Q	D	L	G	F	N	Q	Q	L	L	T	K	T	V	I	G	D	H	N	I	F
Template Known Secondary structure		T	T					T	T					T	T				.	.		S	S					T	T					T	T					T	T					S	S					T	T								S		T	T			T	T	S								S	S
Template Predicted Secondary structure																			.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.																												.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	Q	K	S	Y	L	C	T	G	S	H	D	H	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	H	F	T	I	N	A	T	P	I	V	I	G	E	K	C	W	L	A	T	D	V	F	V	A	P	G	V	T	I	G	D	G	T	V	V	G	A
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	E	Y	S	N	I	H	K	G	T	K	E	D	S	P	T	V	I	G	N	K	N	Y	F	M	G	N	S	H	V	G	H	D	C	I	L	G	N	N	N	I	L	T	H	G	A	V	L	A	G	H	V	T	L	G	N	F	A	F	I	S	G	L	V	A	V	H	Q	F	C	F	V	G	D	Y	S	M	V	A	G
Template Known Secondary structure			T	T							S	B	T	T	B						S	S					T	T					T	T					S	S					T	T					T	T					S	S					T	T					T	T					T	T					T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	S	V	F	K	S	L	P	A	N	V	V	C	R	G	N	P	A	V	V	I	R	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	K	V	V	Q	D	V	P	P	Y	S	T	V	D	G	N	P	S	T	V	V	G	L	N
Template Known Secondary structure		T					S	B	B		T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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