Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACD2
Confidence99.26%DateThu Jan 5 11:17:56 GMT 2012
Rank49Aligned Residues109
% Identity17%Templatec2rijA_
PDB info PDB header:transferaseChain: A: PDB Molecule:putative 2,3,4,5-tetrahydropyridine-2-carboxylate n- PDBTitle: crystal structure of a putative 2,3,4,5-tetrahydropyridine-2-2 carboxylate n-succinyltransferase (cj1605c, dapd) from campylobacter3 jejuni at 1.90 a resolution
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   51........60.........70...... ...80.........90.........100.........110.........120.........
Predicted Secondary structure 














.































Query SS confidence 

























.




















































Query Sequence  GAKIGKNVVIRPSVKITYPWKLTLGD. YAWVGDDVNLYTLGEITIGAHSVISQKSYLCTGSHDHASQHFTINATPIVIGE
Query Conservation 
  

    
     
     
 

 .   

    
     
 

    
   
 
                  
 

 
Alig confidence 

























.







































.











Template Conservation 




 

 

 



  

 








 



 
 
  





 
 

 
  






 


.


 
 

 


Template Sequence  NTRILESSKVRXGASLAAGTTIXPGASYVNFNAGTTGACXVEGRISSSAIVGEGSDVGGGASILGVL. SGTSGNAISVGK
Template Known Secondary structure  T
S
GGGBBTT
B

TT

SSS

TT
SS


S
TT

TT

TT


B
.SSTT

B

T
Template Predicted Secondary structure 



































.








Template SS confidence 















































































   216...220.........230.........240.........250.........260.........270.........280.. .......290....
 
   130.........140.........150.........160..
Predicted Secondary structure 
















Query SS confidence 
































Query Sequence  KCWLATDVFVAPGVTIGDGTVVGARSSVFKSLP
Query Conservation     

    
  

 

   







  


Alig confidence 







..






















Template Conservation 

 




..  

 


 






 
 
 

Template Sequence  ACLLGANS. . VTGIPLGDNCIVDAGIAVLEGTK
Template Known Secondary structure  T

TT
..
S
B
TT

TT

TT
Template Predicted Secondary structure 




..












Template SS confidence 
































   295....300.. .......310.........320.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions