 |
Job Description | P0ACD2 | Confidence | 99.86% | Date | Thu Jan 5 11:17:56 GMT 2012 |
Rank | 33 | Aligned Residues | 114 |
% Identity | 20% | Template | c1hm8A_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:udp-n-acetylglucosamine-1-phosphate uridyltransferase; |
PDBTitle: crystal structure of s.pneumoniae n-acetylglucosamine-1-phosphate2 uridyltransferase, glmu, bound to acetyl coenzyme a
|
Resolution | 2.50 Å |
|
 |
  |   |
51 | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 |
Predicted Secondary structure |   |
|
|  |  |
|
|
|
|  |  |
|
|
|  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|  |  |
|
|
|  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |  |
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | A | K | I | G | K | N | V | V | I | R | P | S | V | K | I | T | Y | P | W | K | L | T | L | G | D | Y | A | W | V | G | D | D | V | N | L | Y | T | L | G | E | I | T | I | G | A | H | S | V | I | S | Q | K | S | Y | L | C | T | G | S | H | D | H | A | S | Q | H | F | T | I | N | A | T | P | I | V | I | G | E | K |
Query Conservation |   |
|   |   |
|
|   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |
|   |
|
|   |   |   |   |
|
|   |   |   |   |
|   |   |   |   |   |
|   |
|
|   |   |   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   | . | . | . |   |
|   |
|   |   |   |   |   |
|
|   |   |   |   |
|   |   | . | . | . |
|
|
|
|   |
|
|   |
|
|   |   |   |
|
|   |
|   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |
|
|
|   |
Template Sequence |   |
N | S | S | L | G | A | Q | V | H | I | G | N | F | V | E | V | K | . |
. |
. |
G | S | S | I | G | E | N | T | K | A | G | H | L | T | Y | I | G | N | . |
. |
. |
C | E | V | G | S | N | V | N | F | G | A | G | T | I | T | V | N | Y | D | . |
. |
. |
. |
. |
. |
. |
. |
G | K | N | K | Y | K | T | V | I | G | D | N |
Template Known Secondary structure |   |
S |
|  |  |
| T | T |
|  |  |  |  |  |  |  |  |  | . | . | . | S |
|  |  |
| T | T |
|  |  |  |  |  |  |  |  |  | S | . | . | . |  |  |  |
| T | T |
|  |  |
| T | T |
|  |  |  |
| B | S | . | . | . | . | . | . | . | . | S | S |
| B |
|
|  |  |  |
| T | T |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  | . | . | . |  |
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  | . | . | . |  |  |  |
|
|
|
|  |  |
|
|
|
|  |  |  |
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
334 | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | |
|
|
. | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | |
|
|
. | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | 390 | . | . | . | . | . | . | . | . | . |
  |
  |   |
131 | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|  |  |
|
|  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
C | W | L | A | T | D | V | F | V | A | P | G | V | T | I | G | D | G | T | V | V | G | A | R | S | S | V | F | K | S | L | P | A | N | V | V | C | R | G | N | P | A | V | V | I | R | E | R |
Query Conservation |   |
  |   |
|
|   |   |   |   |
|   |   |
|
|   |
|
|   |   |   |
|
|
|
|
|
|
|
|   |   |
|
|
|   |   |
|
|
|   |
|   |
|
|
|   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |   |   |   |
|   |   |   |
|   |
|
|   |   |   |   |
|   |   |
|   |   |
|   |   |
|
|
|   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
V | F | V | G | S | N | S | T | I | I | A | P | V | E | L | G | D | N | S | L | V | G | A | G | S | T | I | T | K | D | V | P | A | D | A | I | A | I | G | R | G | R | Q | I | N | K | D | E |
Template Known Secondary structure |   |
|  |  |
| T | T |
|  |  |  | S | S |  |  |  |
| T | T |
|  |  |
| T | T |
|  |  |
| S |
| B |
| T | T |
|  |  |
|
|
|
|
|
|
|
|
| T | T |
Template Predicted Secondary structure |   |
|  |  |
|
|
|
|  |  |  |
|
|  |  |  |
|
|
|
|  |  |
|
|
|
|  |  |
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|