Job Description Q5H772 Confidence 99.77% Date Thu Jan 5 12:37:18 GMT 2012 Rank 214 Aligned Residues 347 % Identity 13% Template d1rv3a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.40

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.					.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.					90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.																			.	.	.	.																				.	.	.
Query SS confidence																																		.	.	.	.																			.	.	.	.																				.	.	.
Query Sequence		N	E	Y	I	D	F	A	A	G	I	A	V	L	N	T	G	H	R	H	P	D	L	V	A	A	V	E	Q	Q	L	Q	Q	.	.	.	.	F	T	H	T	A	Y	Q	I	V	P	Y	E	S	Y	V	T	L	A	.	.	.	.	E	K	I	N	A	L	A	P	V	S	G	Q	A	K	T	A	F	F	T	.	.	.
Query Conservation																																		.	.	.	.																			.	.	.	.																				.	.	.
Alig confidence											.	.						.	.	.														.	.	.	.																			.	.	.	.									.	.										.	.	.
Template Conservation											.	.						.	.	.																																																.	.
Template Sequence		R	V	G	L	E	L	I	A	S	.	.	E	N	F	A	S	.	.	.	R	A	V	L	E	A	L	G	S	C	L	N	N	K	Y	S	L	G	Y	P	G	Q	R	Y	Y	G	G	T	E	H	I	D	E	L	E	T	L	C	Q	K	R	A	L	Q	A	Y	G	.	.	L	D	P	Q	C	W	G	V	N	V	Q	P
Template Known Secondary structure			S	S					T	T	.	.						.	.	.								T	S	G	G	G	T							T	T			S	S	S																				T	T	.	.			T	T	T
Template Predicted Secondary structure											.	.						.	.	.																																																.	.
Template SS confidence
		45	.	.	.	.	50	.	.	.			.	.	.	.	.				.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.			.	.	.	.	110	.	.	.	.	.	.	.
			109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	T	G	A	E	A	V	E	N	A	V	K	I	A	R	A	H	T	G	R	P	G	V	I	A	F	S	G	G	F	H	G	R	T	Y	M	T	M	A	L	T	G	K	V	A	P	Y	K	I	G	F	G	P	F	P	G	S	V	Y	H	V	P	Y	P	S	D	L	H	G	I	S	T	Q	D	S	L	D	A	I	E
Query Conservation		.
Alig confidence		.															.	.	.																																																		.	.	.	.	.	.	.
Template Conservation																	.	.	.																																																		.	.	.	.	.	.	.
Template Sequence		Y	S	G	S	P	A	N	F	A	V	Y	T	A	L	V	.	.	.	E	P	H	G	R	I	M	G	L	D	L	P	D	G	G	H	L	T	H	G	F	M	T	D	K	K	K	I	S	A	T	S	I	F	F	E	S	M	A	Y	K	V	N	P	D	T	G	Y	I	.	.	.	.	.	.	.	D	Y	D	R	L	E
Template Known Secondary structure		S	S													T	.	.	.		T	T								G	G	G	T			G	G	G			B		S	S		B		S						S							B		T	T	T		S	B	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.	.	.																																																		.	.	.	.	.	.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.				.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.								.	.	.	.	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	F	K	S	D	I	E	A	K	Q	V	A	A	I	I	F	E	P	V	Q	G	E	G	G	F	N	V	A	P	K	E	L	V	A	A	I	R	R	L	C	D	E	H	G	I	V	M	I	A	D	E	V	Q	S	G	F	A	R	T	G	K	L	F	A	M	D	H	Y	A	D	K	P	D	L	M	T	M	A	K
Query Conservation
Alig confidence								.	.	.																		.	.	.	.	.	.	.
Template Conservation								.	.	.																		.	.	.	.	.	.	.
Template Sequence		E	N	A	R	L	F	.	.	.	H	P	K	L	I	I	A	G	T	S	C	Y	S	R	N	L	D	.	.	.	.	.	.	.	Y	G	R	L	R	K	I	A	D	E	N	G	A	Y	L	M	A	D	M	A	H	I	S	G	L	V	V	A	G	V	V	P	S	P	F	E	H	C	H	V	V	T	T	T	T	H	K
Template Known Secondary structure								.	.	.			S							S	S			S				.	.	.	.	.	.	.											T	T								T	T	T							T	S	S			G	G	G	T		S						S	S	G
Template Predicted Secondary structure								.	.	.																		.	.	.	.	.	.	.
Template SS confidence
		188	.	190	.	.	.				.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210								.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.										.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.
Query Sequence		S	L	A	G	G	M	P	L	S	G	V	V	G	N	A	N	.	.	.	.	.	.	.	.	.	I	M	D	A	P	A	P	G	G	L	G	G	T	Y	A	G	N	P	L	A	V	A	A	A	H	A	V	L	N	I	I	D	K	E	S	L	C	E	R	A	N	Q	L	G	Q	R	L	K	N	T	L	I	D	A	K
Query Conservation																		.	.	.	.	.	.	.	.	.
Alig confidence						.												.	.	.	.	.	.	.	.	.
Template Conservation						.
Template Sequence		T	L	R	G	.	C	R	A	G	M	I	F	Y	R	R	G	V	R	S	E	I	L	Y	N	L	E	S	L	I	N	S	A	V	F	P	G	L	Q	G	G	P	H	N	H	A	I	A	G	V	A	V	A	L	K	Q	A	M	T	P	E	F	K	E	Y	Q	R	Q	V	V	A	N	C	R	A	L	S	A	A	L	V
Template Known Secondary structure		G	G			.		S									S	B					B												T	T	T	T			S																	T	S
Template Predicted Secondary structure						.
Template SS confidence
		258	.	260	.		.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.								390	.	.	.	.	.	.	.					.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.									.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.									.	.	.	.
Query Sequence		E	S	V	P	A	I	A	A	V	R	G	L	G	S	M	I	A	V	E	F	N	D	P	Q	T	G	E	P	S	A	A	I	A	Q	K	I	Q	Q	R	A	L	A	Q	G	L	L	L	L	T	C	G	.	.	.	.	.	.	.	A	Y	G	N	V	I	R	F	.	.	.	.	L	Y	P	L	T	I	P	D	A	Q
Query Conservation																																																					.	.	.	.	.	.	.									.	.	.	.
Alig confidence																												.	.	.	.	.	.																				.	.	.	.	.	.	.									.	.	.	.
Template Conservation																												.	.	.	.	.	.
Template Sequence		E	L	G	Y	K	I	V	T	G	G	S	D	N	H	L	I	L	V	D	L	R	S	K	G	T	D	.	.	.	.	.	.	G	G	R	A	E	K	V	L	E	A	C	S	I	A	C	N	K	N	T	C	P	G	D	K	S	A	L	R	P	S	G	L	R	L	G	T	P	A	L	T	S	R	G	L	L	E	K	D
Template Known Secondary structure			T	T				G	G	G	S		S	S	S						G	G	G	G	T			.	.	.	.	.	.											T	T									S	S		S		T	T	S														T	T
Template Predicted Secondary structure																												.	.	.	.	.	.
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.							370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
		408	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	A	A	M	K	I	L	Q	D	A	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	Q	K	V	A	H	F	I	H	R	G	I	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		418	.	420	.	.	.	.	.	.	.	.	.	430

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions