Job Description Q5H772 Confidence 99.95% Date Thu Jan 5 12:37:18 GMT 2012 Rank 106 Aligned Residues 333 % Identity 17% Template d1qz9a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 1.85

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.						.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																																											.	.	.	.	.
Query SS confidence																																											.	.	.	.	.
Query Sequence		E	G	N	E	Y	I	D	F	A	A	G	I	A	V	L	N	T	G	H	R	H	P	D	L	V	A	A	V	E	Q	Q	L	Q	Q	F	T	H	T	A	Y	Q	.	.	.	.	.	I	V	P	Y	E	S	Y	V	T	L	A	E	K	I	N	A	L	A	P	V	S	G	Q	A	K	T	A	F	F	T	T	G	A	E
Query Conservation																																											.	.	.	.	.
Alig confidence												.	.	.	.	.	.																										.	.	.	.	.																					.
Template Conservation												.	.	.	.	.	.																																																			.
Template Sequence		E	G	V	I	Y	L	D	G	N	S	.	.	.	.	.	.	L	G	A	R	P	V	A	A	L	A	R	A	Q	A	V	I	A	E	E	W	G	N	G	L	I	R	S	W	N	S	A	G	W	R	D	L	S	E	R	L	G	N	R	L	A	T	L	I	G	A	.	R	D	G	E	V	V	V	T	D	T	T	S	I
Template Known Secondary structure		T	T						T	T	T	.	.	.	.	.	.	S				B	T	T											T						G	G	G					T	S	G	G	G											T	T	T	T		.		T	T	S					S
Template Predicted Secondary structure												.	.	.	.	.	.																																																			.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.							.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.
		113	.	.	.	.	.	.	120	.	.						.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.
Query SS confidence												.	.	.	.	.
Query Sequence		A	V	E	N	A	V	K	I	A	R	.	.	.	.	.	A	H	T	G	R	P	G	V	I	A	F	S	G	G	F	H	G	R	T	Y	M	T	M	A	L	T	G	K	V	A	P	Y	K	I	G	F	G	P	F	P	G	S	V	Y	H	V	P	Y	P	S	D	L	H	G	I	S	T	Q	D	S	L	D	A	I	E
Query Conservation												.	.	.	.	.
Alig confidence												.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	L	F	K	V	L	S	A	A	L	R	V	Q	A	T	R	S	P	E	R	R	V	I	V	T	E	T	S	N	F	P	T	D	L	Y	I	A	E	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	M	L	Q	Q	G	Y	T	L	R	L	V	D	S	P	E	E	L	P
Template Known Secondary structure																		S	T	T								T	T	S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						S	S							S	S	G	G	G
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.																					140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	F	K	S	D	I	E	A	K	Q	V	A	A	I	I	F	E	P	V	Q	G	E	G	G	F	N	V	A	P	K	E	L	V	A	A	I	R	R	L	C	D	E	H	G	I	V	M	I	A	D	E	V	Q	S	G	F	A	R	T	G	K	L	F	A	M	D	H	Y	A	D	K	P	D	L	M	T	M	A	K
Query Conservation
Alig confidence					.	.	.	.	.																						.	.	.	.																												.	.	.
Template Conservation					.	.	.	.	.																						.	.	.	.																												.	.	.
Template Sequence		Q	A	I	.	.	.	.	.	D	Q	D	T	A	V	V	M	L	T	H	V	N	Y	K	T	G	Y	M	H	D	.	.	.	.	M	Q	A	L	T	A	L	S	H	E	C	G	A	L	A	I	W	D	L	A	H	S	A	G	A	V	P	.	.	.	V	D	L	H	Q	A	G	A	D	Y	A	I	G	C	T	Y	K
Template Known Secondary structure					.	.	.	.	.	S	T	T								S	B		T	T	T		B	B			.	.	.	.												T								T	T	T	T	T	T	S		.	.	.							T		S						S	S	S
Template Predicted Secondary structure					.	.	.	.	.																						.	.	.	.																												.	.	.
Template SS confidence
		160	.	.						.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.					.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210				.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		268	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.																								.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.				.	.	.	320
Predicted Secondary structure							.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.
Query SS confidence							.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.
Query Sequence		S	L	A	G	G	.	M	P	L	S	G	V	V	G	N	A	N	I	M	D	A	P	A	P	G	G	L	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	Y	A	G	N	P	L	A	V	A	A	A	H	A	V	L	N	I	I	D	K	.	.	.	E	S	L	C
Query Conservation							.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.
Alig confidence							.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.
Template Conservation
Template Sequence		Y	L	N	G	G	P	G	S	Q	A	F	V	W	V	S	P	Q	L	C	D	L	V	P	Q	P	L	S	G	W	F	G	H	S	R	Q	F	A	M	E	P	R	Y	E	P	S	N	G	I	A	R	Y	L	C	G	T	Q	P	I	T	S	L	A	M	V	E	C	G	L	D	V	F	A	Q	T	D	M	A	S	L	R
Template Known Secondary structure		T	T				T	T									T	T	T	T	T	T	S			S				G	G	G	B		T	T	S				S	S			B		S	S	G	G	G	G			S																		T	T	S
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.					.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.
Query SS confidence																									.	.	.	.
Query Sequence		E	R	A	N	Q	L	G	Q	R	L	K	N	T	L	I	D	A	K	E	S	V	P	A	.	.	.	.	I	A	A	V	R	G	L	G	S	M	I	A	V	E	F	N	D	P	Q	T	G	E	P	S	A	A	I	A	Q	K	I	Q	Q	R	A	L	A	Q	G	L	L	L	L	T	C	G	A	Y	G	N	V	I	R
Query Conservation																									.	.	.	.
Alig confidence																									.	.	.	.																		.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.																				.	.
Template Sequence		R	K	S	L	A	L	T	D	L	F	I	E	L	V	E	Q	R	C	A	A	H	E	L	T	L	V	T	P	R	E	H	A	K	R	G	S	H	V	S	F	E	H	P	E	.	.	.	.	.	.	.	.	.	.	G	Y	A	V	I	Q	A	L	I	D	R	G	V	I	G	D	Y	R	E	.	.	P	R	I	M	R
Template Known Secondary structure																				T	T	S						S		S	S	G	G	G	B		S							T	T	.	.	.	.	.	.	.	.	.	.										T	T	T							T	.	.	T	T
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.																				.	.
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.											.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370			.	.	.	.	.
		397	.	.		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		F	L	Y	.	P	L	T	I	P	D	A	Q	F	D	A	A	M	K	I	L	Q	D	A	L	S	D
Query Conservation					.
Alig confidence					.
Template Conservation
Template Sequence		F	G	F	T	P	L	Y	T	T	F	T	E	V	W	D	A	V	Q	I	L	G	E	I	L	D	R
Template Known Secondary structure						T	T	T
Template Predicted Secondary structure
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions