Job Description Q5H772 Confidence 99.74% Date Thu Jan 5 12:37:18 GMT 2012 Rank 220 Aligned Residues 350 % Identity 13% Template d1ejia_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.90

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.					.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.					.
Predicted Secondary structure																																		.	.	.	.																											.	.												.	.	.	.
Query SS confidence																																		.	.	.	.																											.	.												.	.	.	.
Query Sequence		N	E	Y	I	D	F	A	A	G	I	A	V	L	N	T	G	H	R	H	P	D	L	V	A	A	V	E	Q	Q	L	Q	Q	.	.	.	.	F	T	H	T	A	Y	Q	I	V	P	Y	E	S	Y	V	T	L	A	E	K	I	N	A	L	A	P	.	.	V	S	G	Q	A	K	T	A	F	F	T	.	.	.	.	T
Query Conservation																																		.	.	.	.																											.	.												.	.	.	.
Alig confidence											.	.					.	.	.															.	.	.	.																											.	.												.	.	.	.
Template Conservation											.	.					.	.	.
Template Sequence		R	V	G	L	E	L	I	A	S	.	.	E	N	F	A	.	.	.	S	R	A	V	L	E	A	L	G	S	S	L	N	N	K	Y	S	E	G	Y	P	G	Q	R	Y	Y	G	G	T	E	F	I	D	E	L	E	X	L	C	Q	K	R	A	L	Q	A	Y	H	L	D	P	Q	C	W	G	V	N	V	Q	P	Y	S
Template Known Secondary structure			S	S					T	T	.	.					.	.	.									T	S	G	G	G	G					S		S	S	S		S	S	S																				T	T			T	T	T								S	S
Template Predicted Secondary structure											.	.					.	.	.
Template SS confidence
		45	.	.	.	.	50	.	.	.			.	.	.	.				.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	E	A	V	E	N	A	V	K	I	A	R	A	H	T	G	R	P	G	V	I	A	F	S	G	G	F	H	G	R	T	Y	M	T	M	A	L	T	G	K	V	A	P	Y	K	I	G	F	G	P	F	P	G	S	V	Y	H	V	P	Y	P	S	D	L	H	G	I	S	T	Q	D	S	L	D	A	I	E	R	L
Query Conservation
Alig confidence														.	.	.																																																			.	.	.	.	.	.	.
Template Conservation														.	.	.																																																			.	.	.	.	.	.	.
Template Sequence		G	S	P	A	N	F	A	V	Y	T	A	L	.	.	.	V	E	P	H	G	R	I	X	G	L	D	L	P	D	G	G	H	L	T	H	G	F	X	T	D	K	K	K	I	S	A	T	S	I	F	F	E	S	X	P	Y	K	V	Y	P	E	T	G	Y	I	.	.	.	.	.	.	.	N	Y	D	Q	L	E	E	N
Template Known Secondary structure														.	.	.	T		T	T								G	G	G	T			G	G	G			B		S	S		B		S						S							B		T	T	T		S	B	.	.	.	.	.	.	.
Template Predicted Secondary structure														.	.	.																																																			.	.	.	.	.	.	.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.				.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.								.	.	.	.	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	K	S	D	I	E	A	K	Q	V	A	A	I	I	F	E	P	V	Q	G	E	G	G	F	N	V	A	P	K	E	L	V	A	A	I	R	R	L	C	D	E	H	G	I	V	M	I	A	D	E	V	Q	S	G	F	A	R	T	G	K	L	F	A	M	D	H	Y	A	D	K	P	D	L	M	T	M	A	K	S	L
Query Conservation
Alig confidence						.	.	.																		.	.	.	.	.	.	.
Template Conservation						.	.	.																		.	.	.	.	.	.	.
Template Sequence		A	S	L	F	.	.	.	H	P	K	L	I	I	A	G	T	S	C	Y	S	R	N	L	D	.	.	.	.	.	.	.	Y	A	R	L	R	K	I	A	D	D	N	G	A	Y	L	X	A	D	X	A	H	I	S	G	L	V	A	A	G	V	V	P	S	P	F	E	H	C	H	V	V	T	T	T	T	H	K	T	L
Template Known Secondary structure						.	.	.			S							S	S			S				.	.	.	.	.	.	.											T	T								G	G	G						T	T	S	S			G	G	G	T		S						S	S	G	G	G
Template Predicted Secondary structure						.	.	.																		.	.	.	.	.	.	.
Template SS confidence
		190	.	.	.				.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210								.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		270	.	.	.	.	.	.	.	.	.	280	.	.															.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	G	G	M	P	L	S	G	V	V	G	N	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	I	M	D	A	P	A	P	G	G	L	G	G	T	Y	A	G	N	P	L	A	V	A	A	A	H	A	V	L	N	I	I	D	K	E	S	L	C	E	R	A	N	Q	L	G	Q	R	L	K	N	T	L	I
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	G	C	R	A	G	X	I	F	Y	R	K	G	V	R	S	V	D	P	K	T	G	K	E	T	Y	Y	E	L	E	S	L	I	N	S	A	V	F	P	G	L	Q	G	G	P	H	N	H	A	I	A	G	V	A	V	A	L	K	Q	A	X	T	T	E	F	K	I	Y	Q	L	Q	V	L	A	N	C	R	A	L	S
Template Known Secondary structure					S															S	T	T																	T	T	T	T			S																	T	S
Template Predicted Secondary structure
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		336	.	.	.	340	.	.	.	.	.	.	.	.	.		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.								.	390	.	.	.	.	.	.	.					.	.	400	.	.	.
Predicted Secondary structure																.																																								.	.	.	.	.	.	.										.	.	.	.
Query SS confidence																.																																								.	.	.	.	.	.	.										.	.	.	.
Query Sequence		D	A	K	E	S	V	P	A	I	A	A	V	R	G	.	L	G	S	M	I	A	V	E	F	N	D	P	Q	T	G	E	P	S	A	A	I	A	Q	K	I	Q	Q	R	A	L	A	Q	G	L	L	L	L	T	C	.	.	.	.	.	.	.	G	A	Y	G	N	V	I	R	F	.	.	.	.	L	Y	P	L	T	I
Query Conservation																.																																								.	.	.	.	.	.	.										.	.	.	.
Alig confidence																.																.	.	.	.	.	.																			.	.	.	.	.	.	.										.	.	.	.
Template Conservation																																.	.	.	.	.	.
Template Sequence		D	A	L	T	E	L	G	Y	K	I	V	T	G	G	S	D	N	H	L	I	L	X	D	L	R	S	K	G	T	D	.	.	.	.	.	.	G	G	R	A	E	K	V	L	E	A	C	S	I	A	C	N	K	N	T	C	P	G	D	K	S	A	L	R	P	S	G	L	R	L	G	T	P	A	L	T	S	R	G	L
Template Known Secondary structure							T	T			B	T	T	S	S		S	S	S						G	G	G	G	T			.	.	.	.	.	.											T	T				B					S	S	S	S		T	T	S		S											T	T	T
Template Predicted Secondary structure																																.	.	.	.	.	.
Template SS confidence
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.							370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	A	Q	F	D	A	A	M	K	I	L	Q	D	A	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	E	D	F	Q	K	V	A	H	F	I	H	R	G	I	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions