Return to main results Retrieve Phyre Job Id

Job DescriptionQ5H772
Confidence99.94%DateThu Jan 5 12:37:18 GMT 2012
Rank112Aligned Residues333
% Identity11%Templated1d2fa_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   58.60.........70.........80.........90......... 100.........110.........120.........130......
Predicted Secondary structure 














.











Query SS confidence 









































.




































Query Sequence  HPDLVAAVEQQLQQFTHTAYQIVPYESYVTLAEKINALAPVS. GQAKTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGG
Query Conservation 

 
  
   

                  

  
       .
   
    


 
   

 

     
  

     
Alig confidence 









































.

















...















Template Conservation 
  
  
   
       
       

 


               
  
 
 
  
   ...       

 

   
Template Sequence  APCIIEALNQRLMHGVFGYSRWKNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSEL. . . IRQWSETGEGVVIHTP
Template Known Secondary structure 
TT






S

S




GGGS
...SS
TT
S
Template Predicted Secondary structure 


















...






Template SS confidence 















































































   43......50.........60.........70.........80.........90.........100... ......110.........
 
   137..140.........150.........160.........170.........180.........190.........200.........210......
Predicted Secondary structure 




















































Query SS confidence 















































































Query Sequence  FHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVA
Query Conservation   

    
   
                                 
   

  
         
 

 


    
    
Alig confidence 












...............

























.....




















Template Conservation              
...............                          .....                
    
Template Sequence  AYDAFYKAIEGNQ. . . . . . . . . . . . . . . RTVMPVALEKQADGWFCDMGKLEAVL. . . . . AKPECKIMLLCSPQNPTGKVW
Template Known Secondary structure 

TT...............


SSS

.....TSTTSS
TTT



Template Predicted Secondary structure 


...............












.....

















Template SS confidence 















































































   120.........130.. .......140.........150........ .160.........170.........
 
   217..220.........230.........240.........250.........260... ......270 .........280.........290..
Predicted Secondary structure 





















...
.


Query SS confidence 














































. . .






.





















Query Sequence  PKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPDLM. . . TMAKSLA. GGMPLSGVVGNANIMDAPAPGG
Query Conservation      
  
  
    
  

 

  

 
  
            

 ...
 

 
 .     
                
Alig confidence 














































...






.





















Template Conservation      
  
          

 
                            
 

     


 
                
Template Sequence  TCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWALLTSGSKSFNIPALTGAYGIIENSSSRDAYLSA
Template Known Secondary structure 
TTTT

TTTT
B
SSS



GGGT

SS
ST
GGG


S
Template Predicted Secondary structure 





























Template SS confidence 















































































   180.........190.........200.........210.........220.........230.........240.........250.........
 
   293......300 .........310.........320.........330.........340.........350 .........360.........
Predicted Secondary structure 







.







..










Query SS confidence 







.

















































. .


















Query Sequence  LGGTYAGN. PLAVAAAHAVLNIIDKESLCERANQLGQRLKNTLIDAKESVPAIAAVRGL. . GSMIAVEFNDPQTGEPSAA
Query Conservation     
    .    
   
                    
   
         
  
 
 ..
    
             
Alig confidence 







.

















































..













.....
Template Conservation                  
                                         
         
      .....
Template Sequence  LKGRDGLSSPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLNID. . . . .
Template Known Secondary structure  TTS


S



SS





SB
S
GGG


.....
Template Predicted Secondary structure 



























.....
Template SS confidence 















































































   260.........270.........280.........290.........300.........310.........320.........330....
 
   370.........380. ........390. ........400.........410.........420.
Predicted Secondary structure 
.



....








Query SS confidence 











.









. . . .





























Query Sequence  IAQKIQQRALAQ. GLLLLTCGAY. . . . GNVIRFLYPLTIPDAQFDAAMKILQDALSD
Query Conservation   
      
   .

 
      ....   

   
   
   
   
  
  

 
Alig confidence  .










.









....





..





















Template Conservation  .       
    

 
 

  
       


..
       
  

  
  

  
Template Sequence  . DNALQKALIEQEKVAIMPGYTYGEEGRGFVRL. . NAGCPRSKLEKGVAGLINAIRA
Template Known Secondary structure  .TT

GGGG
GGGTT..

S
Template Predicted Secondary structure  .








..


Template SS confidence 
























































   335....340.........350.........360...... ...370.........380........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions