Return to main results Retrieve Phyre Job Id

Job DescriptionQ5H772
Confidence99.95%DateThu Jan 5 12:37:18 GMT 2012
Rank85Aligned Residues383
% Identity15%Templated1ax4a_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases Beta-eliminating lyases
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40.........50.........60. ........70.........80.........
Predicted Secondary structure 


















...........









Query SS confidence 








































. . . . . . . . . . .



























Query Sequence  MCNFFAQSAENATLKDVEGNEYIDFAAGIAVLNTGHRHPDL. . . . . . . . . . . VAAVEQQLQQFTHTAYQIVPYESYVTLA
Query Conservation    
  
    
  
 
 

   

         

  

 
...........  
   

                  

Alig confidence 








































...........













...










Template Conservation    
                
   
   
 
   
      


 


 
        

   

  ...
        
 
Template Sequence  VEPFRIKMVEKIRVPSREEREAALKEAGYNPFLLPSSAVYIDLLTDSGTNAMSDHQWAAMITGDEA. . . YAGSRNYYDLK
Template Known Secondary structure 

SS

S








TTS
GGGS
GGG
S
S
SSS




T



...SSS
Template Predicted Secondary structure 





































...





Template SS confidence 















































































   6...10.........20.........30.........40.........50.........60.........70. ........80..
 
   90.........100.........110.........120..... ....130.........140.........150.........160.....
Predicted Secondary structure 










....



























Query SS confidence 



































. . . .







































Query Sequence  EKINALAPVSGQAKTAFFTTGAEAVENAVKIARAHT. . . . GRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSV
Query Conservation    
       
   
    


 
   

 

    .... 
  

      

    
   
                 
Alig confidence 






...

























....







































Template Conservation 
  
   ...
 
  
   


 

  
       
          
                
                
Template Sequence  DKAKELF. . . NYDYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFISNFHFDTTAAHVELNGCKAINIVTEKAFDSET
Template Known Secondary structure  ...


SSTT

SS
SS

TT

B
GGGG
TTS
Template Predicted Secondary structure 
...



































Template SS confidence 















































































   83...... 90.........100.........110.........120.........130.........140.........150.........
 
   166...170.........180.........190.........200.........210.........220.........230.........240..
Predicted Secondary structure 




































...
Query SS confidence 












































































. . .
Query Sequence  YHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQS. . .
Query Conservation                  
   

  
         
 

 


    
        
  
  
    
  

 

  
...
Alig confidence 







........











.















































...
Template Conservation       
  ........
   
   
   .       
 
  
 
  

       
  
       
     
 
    
Template Sequence  YDDWKGDF. . . . . . . . DIKKLKENIAQH. GADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCEN
Template Known Secondary structure 

TTTT
B........
.
GGGSSBTTTTSB


T


TT
Template Predicted Secondary structure 







........

.























Template SS confidence 















































































   160....... ..170......... 180.........190.........200.........210.........220.........230
 
   243......250.........260.........270.........280 .........290.. .......300.....
Predicted Secondary structure  .........

















...
.....







Query SS confidence  . . . . . . . . .





































. . .











. . . . .












Query Sequence  . . . . . . . . . GFARTGKLFAMDHYADKPDLMTMAKSLAGGMPLSGVVG. . . NANIMDAPAPGG. . . . . LGGTYAGNPLAVA
Query Conservation  .........
 
  
            

 
 

 
      
    ...            .....   
        
Alig confidence  .........























.












...











.....












Template Conservation 
        
                 
    
. 
      

 
                    
    
        
Template Sequence  AYFIKARDPKYKNATIKEVIFDMYKYADALTMS. AKDPLLNIGGLVAIRDNEEIFTLARQRCVPMEGFVTYGGLAGRDMA
Template Known Secondary structure 
GGGTT

GGG
S.





SS
SS
T
STTTTT

Template Predicted Secondary structure 



















.


























Template SS confidence 















































































   231........240.........250.........260... ......270.........280.........290.........300.........
 
   306...310.........320.........330.........340.........350.........360.........370.........380.....
Predicted Secondary structure 




















Query SS confidence 















































































Query Sequence  AAHAVLNIIDKESLCERANQLGQRLKNTLIDAKESVPAIAAVRGLGSMIAVEFNDPQTGEPSAAIAQKIQQRALAQGLLL
Query Conservation     
                    
   
         
  
 
 
    
              
      
   

 
Alig confidence 































..













































Template Conservation 
 
  
        
  
      
   
   ..
 

    
   
 

     
               
    

  
Template Sequence  AMVQGLEEGTEEEYLHYRIGQVKYLGDRLREA. . GIPIQYPTGGHAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRA
Template Known Secondary structure  TT
T..T

B
SS

SSSTTT
TTS
GGG


Template Predicted Secondary structure 
..




















Template SS confidence 















































































   311........320.........330.........340.. .......350.........360.........370.........380........
 
   386... 390........ .400.........410.........420.
Predicted Secondary structure 
...............



.






Query SS confidence 



. . . . . . . . . . . . . . .








.






















Query Sequence  LTCG. . . . . . . . . . . . . . . AYGNVIRFL. YPLTIPDAQFDAAMKILQDALSD
Query Conservation      ...............     

  . 
   
   
   
  
  

 
Alig confidence 



...............








.






















Template Conservation                
         



 
    
 



 
   
  
   
Template Sequence  VEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKEK
Template Known Secondary structure  S
B
TTT
SB


S



TTSS
TT
Template Predicted Secondary structure 

























Template SS confidence 



















































   389390.........400.........410.........420.........430.........440
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions