Job Description Q5H772 Confidence 99.69% Date Thu Jan 5 12:37:18 GMT 2012 Rank 229 Aligned Residues 317 % Identity 11% Template c3qm2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:phosphoserine aminotransferase; PDBTitle: 2.25 angstrom crystal structure of phosphoserine aminotransferase2 (serc) from salmonella enterica subsp. enterica serovar typhimurium Resolution 2.25 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		E	Y	I	D	F	A	A	G	I	A	V	L	N	T	G	H	R	H	P	D	L	V	A	A	V	E	Q	Q	L	Q	Q	F	T	H	T	A	Y	Q	I	V	P	Y	E	S	Y	V	T	L	A	E	K	I	N	A	L	A	P	V	S	G	Q	A	K	T	A	F	F	T	.	T	G	A	E	A	V	E	N	A	V	K
Query Conservation																																																																						.
Alig confidence										.	.					.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation										.	.					.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	V	F	N	F	S	S	G	.	.	P	A	M	L	.	.	.	P	A	E	V	L	K	L	A	Q	Q	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	E	A	E	Q	D	F	R	D	L	L	N	I	P	S	N	Y	K	V	L	F	C	H	G	G	G	R	G	Q	F	A	G	V	P	L
Template Known Secondary structure								S	S	.	.	S				.	.	.									T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T			T	T								S		T	T
Template Predicted Secondary structure										.	.					.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10			.	.	.	.				.	.	.	.	.	20	.	.	.	.	.	.																.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	R	A	H	T	G	R	P	G	V	I	A	F	S	G	G	F	H	G	R	T	Y	M	T	M	A	L	T	G	K	V	A	P	Y	K	I	G	F	G	P	F	P	G	S	V	Y	H	V	P	Y	P	S	D	L	H	G	I	S	T	Q	D	S	L	D	A	I	E	R	L	F	K	S	D	I	E	A	K	Q	V
Query Conservation
Alig confidence				.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Template Conservation				.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Template Sequence		N	L	.	.	L	G	D	K	T	T	A	D	Y	V	D	A	G	Y	W	A	A	S	A	I	K	E	A	K	K	Y	C	A	P	Q	I	I	D	A	K	I	T	V	D	G	K	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	K	P	M	R	E	W	Q	L	S	.	.	.	.	D	N	A
Template Known Secondary structure				.	.		T	T									S	S											T	T	T	S												T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					G	G	G					.	.	.	.	T	T
Template Predicted Secondary structure				.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Template SS confidence
		86	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.																	130	.	.	.	.	.	.	.	.	.	140					.	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	I	I	F	E	P	V	Q	G	E	G	G	F	N	V	A	P	K	E	L	V	A	A	I	R	R	L	C	D	E	H	G	I	V	M	I	A	D	E	V	Q	S	G	F	A	R	T	G	K	L	F	A	M	D	H	Y	A	D	K	P	D	L	M	T	M	A	K	S	L	A	G	G	M	P	L	S	G	V	V
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.																					.	.	.	.	.																						.
Template Conservation																						.	.	.	.	.	.	.	.																					.	.	.	.	.																						.
Template Sequence		A	Y	L	H	Y	C	P	N	E	T	I	D	G	I	A	I	D	E	T	P	.	.	.	.	.	.	.	.	D	F	G	P	E	V	V	V	T	A	D	F	S	S	T	I	L	S	A	P	.	.	.	.	.	L	D	V	S	R	Y	G	V	I	Y	A	G	A	Q	K	N	I	G	P	A	G	.	L	T	L	V	I
Template Known Secondary structure		S						S			T	T	T	T								.	.	.	.	.	.	.	.				T	T								T	T	T	T	T	S	S		.	.	.	.	.			G	G	G		S						T	T	T	T	T			T	T	.
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.																					.	.	.	.	.																						.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.									.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.						.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.						.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure																				.	.	.	.	.																																																						.	.	.	.
Query SS confidence																				.	.	.	.	.																																																						.	.	.	.
Query Sequence		G	N	A	N	I	M	D	A	P	A	P	G	G	L	G	G	T	Y	.	.	.	.	.	A	G	N	P	L	A	V	A	A	A	H	A	V	L	N	I	I	D	K	E	S	L	C	E	R	A	N	Q	L	G	Q	R	L	K	N	T	L	I	D	A	K	E	S	V	P	A	I	A	A	V	R	G	L	.	.	.	.
Query Conservation																				.	.	.	.	.																																																						.	.	.	.
Alig confidence																				.	.	.	.	.																																																						.	.	.	.
Template Conservation
Template Sequence		V	R	E	D	L	L	G	K	A	H	E	S	C	P	S	I	L	D	Y	T	V	L	N	D	N	P	T	F	A	W	Y	L	S	G	L	V	F	K	W	L	K	A	Q	G	G	V	A	A	M	H	K	I	N	Q	Q	K	A	E	L	L	Y	G	V	I	D	N	S	D	F	Y	R	N	D	V	A	Q	A	N	R	S
Template Known Secondary structure				G	G	G		S				T	T	S		G	G	G											S																T																						T		S	S					B		G	G	G	B
Template Predicted Secondary structure
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	M	I	A	V	E	F	N	D	P	Q	T	G	E	P	S	A	A	I	A	Q	K	I	Q	Q	R	A	L	A	Q	G	L	L	L	L	T	C	G	A	Y	G	N	V	I	R	F	L	Y	P	L	T	I	P	D	A	Q	F	D	A	A	M	K	I	L	Q	D	A	L	S
Query Conservation
Alig confidence										.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.
Template Sequence		R	M	N	V	P	F	Q	L	.	.	.	.	.	.	.	A	D	N	T	L	D	K	V	F	L	E	E	S	F	A	A	G	L	H	A	L	K	G	H	R	V	V	G	G	M	R	A	S	I	Y	N	A	M	P	I	E	G	V	K	A	L	T	D	F	M	I	D	F	E	R
Template Known Secondary structure		S	S							.	.	.	.	.	.	.	S	S	G	G	G											T	T					B			T	T	T		S							T	T	S
Template Predicted Secondary structure										.	.	.	.	.	.	.
Template SS confidence
		297	.	.	300	.	.	.	.								.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions