Job Description Q5H772 Confidence 99.94% Date Thu Jan 5 12:37:18 GMT 2012 Rank 108 Aligned Residues 323 % Identity 15% Template c3ihjA_ PDB info PDB header:transferase Chain: A: PDB Molecule:alanine aminotransferase 2; PDBTitle: human alanine aminotransferase 2 in complex with plp Resolution 2.30 Å

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		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.							.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.			.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																						.	.	.	.	.	.																														.	.
Query SS confidence																						.	.	.	.	.	.																														.	.
Query Sequence		I	V	P	Y	E	S	Y	V	T	L	A	E	K	I	N	A	L	A	P	V	.	.	.	.	.	.	S	G	Q	A	K	T	A	F	F	T	T	G	A	E	A	V	E	N	A	V	K	I	A	R	A	H	T	G	R	.	.	P	G	V	I	A	F	S	G	G	F	H	G	R	T	Y	M	T	M	A	L	T	G	K
Query Conservation																						.	.	.	.	.	.																														.	.
Alig confidence																						.	.	.	.	.	.																														.	.																					.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		Q	A	C	S	Q	G	V	N	C	I	R	E	D	V	A	A	Y	I	T	R	R	D	G	G	V	P	A	D	P	D	N	I	Y	L	T	T	G	A	S	D	G	I	S	T	I	L	K	I	L	V	S	G	G	G	K	S	R	T	G	V	M	I	P	I	P	Q	Y	P	L	Y	S	A	V	I	S	E	L	.	.	.
Template Known Secondary structure							S																T	T	T					G	G	G					S	S																	G	G	G	S								S			T									T	.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	P	Y	K	I	G	F	G	P	F	P	G	S	V	Y	H	V	P	Y	P	S	D	L	H	G	I	S	T	Q	D	S	L	D	A	I	E	R	L	F	K	S	D	I	E	A	K	Q	V	A	A	I	I	F	E	P	V	Q	G	E	G	G	F	N	V	A	P	K	E	L	V	A	A	I	R	R	L	C	D	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																		.																								.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																		.																								.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	I	Q	V	N	Y	Y	L	D	E	E	N	C	W	A	L	.	N	V	N	E	L	R	R	A	V	Q	E	A	K	D	H	C	D	P	K	V	L	C	I	.	I	N	P	G	N	P	T	G	Q	V	Q	S	R	K	C	I	E	D	V	I	H	F	A	W	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	T									B	G	G	G	T	T	B		.													T	T	T	S								.		S	S		T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																		.																								.
Template SS confidence
															227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.		.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.														250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270			.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.																								.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.																								.	.
Query Sequence		H	G	I	V	M	I	A	D	E	V	Q	S	G	F	A	R	T	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	L	F	A	M	D	H	Y	A	D	K	P	D	L	M	T	M	A	K	S	L	A	.	.	G	G	M	P	L	S	G	V	V	G	N	A	N	I	M	D	A	P	A	P	G	G	L	.	.
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.																								.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.																								.	.
Template Conservation
Template Sequence		E	K	L	F	L	L	A	D	E	V	Y	Q	D	N	V	Y	S	P	D	C	R	F	H	S	F	K	K	V	L	Y	E	M	G	P	E	Y	S	S	N	V	E	L	A	S	F	H	S	T	S	K	G	Y	M	G	E	C	G	Y	R	G	G	Y	M	E	V	I	N	L	H	P	E	I	K	G	Q	L	V	K	L	L
Template Known Secondary structure			T								T	T	T	T		B			T	T													T						T	T									S	S	S	S	T	T			S	S	S									S
Template Predicted Secondary structure
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.									.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350		.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.																																					.
Query SS confidence																							.	.	.	.	.	.	.	.																																					.
Query Sequence		G	G	T	Y	A	G	N	P	L	A	V	A	A	A	H	A	V	L	N	I	I	.	.	.	.	.	.	.	.	D	K	E	S	L	C	E	R	A	N	Q	L	G	Q	R	L	K	N	T	L	I	D	A	K	E	S	V	P	A	I	A	A	V	R	G	L	.	G	S	M	I	A	V	E	F	N	D	P	Q	T	G
Query Conservation																							.	.	.	.	.	.	.	.																																					.
Alig confidence																							.	.	.	.	.	.	.	.																																					.
Template Conservation
Template Sequence		S	V	R	L	C	P	P	V	S	G	Q	A	A	M	D	I	V	V	N	P	P	V	A	G	E	E	S	F	E	Q	F	S	R	E	K	E	S	V	L	G	N	L	A	K	K	A	K	L	T	E	D	L	F	N	Q	V	P	G	I	H	C	N	P	L	Q	G	A	M	Y	A	F	P	R	I	F	I	P	A	K	A
Template Known Secondary structure				S															T					T	T	S	T	T																												T	S	T	T								B	S	S
Template Predicted Secondary structure
Template SS confidence
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
		365	.	.	.							.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.						.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure						.	.	.	.	.	.																									.	.	.	.	.
Query SS confidence						.	.	.	.	.	.																									.	.	.	.	.
Query Sequence		E	P	S	A	.	.	.	.	.	.	A	I	A	Q	K	I	Q	Q	R	A	L	A	Q	G	L	L	L	L	T	C	G	A	Y	G	.	.	.	.	.	N	V	I	R	F	L	Y	P	L	T	I	P	D	A	Q	F	D	A	A	M	K	I	L	Q	D	A	L	S	D
Query Conservation						.	.	.	.	.	.																									.	.	.	.	.
Alig confidence						.	.	.	.	.	.																									.	.	.	.	.						.	.
Template Conservation																																														.	.
Template Sequence		V	E	A	A	Q	A	H	Q	M	A	P	D	M	F	Y	C	M	K	L	L	E	E	T	G	I	C	V	V	P	G	S	G	F	G	Q	R	E	G	T	Y	H	F	R	M	.	.	T	I	L	P	P	V	E	K	L	K	T	V	L	Q	K	V	K	D	F	H	I	N
Template Known Secondary structure								T	T	S																B					G	G	G	T				T	T			B				.	.				S
Template Predicted Secondary structure																																														.	.
Template SS confidence
		452	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.			.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions