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Job DescriptionQ5H772
Confidence100.00%DateThu Jan 5 12:37:18 GMT 2012
Rank9Aligned Residues407
% Identity26%Templatec3i5tB_
PDB info PDB header:transferaseChain: B: PDB Molecule:aminotransferase; PDBTitle: crystal structure of aminotransferase prk07036 from rhodobacter2 sphaeroides kd131
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.... .....20.........30.........40.........50.........60.........70.........
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Query Sequence  FHQRRLSAT. . . . . . PRGVGVMCNFFAQSAENATLKDVEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAYQI
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Template Sequence  VGAAMRDHILLPAQEMAKLGKSAQPVLTHAEGIYVHTEDGRRLIDGPAGMWCAQVGYGRREIVDAMAHQAMVLPYASPWY
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TT

GGGTTT




BTTT

TTT
TT
B






TTT
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   11........20.........30.........40.........50.........60.........70.........80.........90
 
   80.........90.........100.........110.........120...... ...130.........140.........150...
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Query Sequence  VPYESYVTLAEKINALAPVSGQAKTAFFTTGAEAVENAVKIARAHTG. . . . . . RPGVIAFSGGFHGRTYMTMALTGKVAP
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Template Sequence  MATSPAARLAEKIATLTPG. DLNRIFFTTGGSTAVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTG.
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TTSST.T

SSTT
TT

TT



SST


GG.
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   91........100......... 110.........120.........130.........140.........150.........160........
 
   154.....160.........170....... ..180.........190.........200.........210.........220.......
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Query Sequence  YKIGFGPFPGSVYHVPYPSDLHGI. . . . . . STQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRL
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Template Sequence  NWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESL. GPDTIAAFLAEPILASGGVIIPPAGYHARFKAI
Template Known Secondary structure  G
TTS



TT



GGG
TTS
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GGG
SSBTTTTSB


TT
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   169170.........180.........190.........200.........210.... .....220.........230.........240.......
 
   228.230.........240.........250..... ....260.........270... ......280.........290 ........
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Query Sequence  CDEHGIVMIADEVQSGFARTGKLFAMDH. YADKPDLMTMAKSLAGGM. PLSGVVGNANIMDAPAP. . . . . . . GGLGGTYA
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Template Sequence  CEKHDILYISDEVVTGFGRCGEWFASEKVFGVVPDIITFAKGVTSGYVPLGGLAISEAVLARISGENAKGSWFTNGYTYS
Template Known Secondary structure  TT

TTTTTTTTSSS
TT



S
GGGGTTSS


TTSGGG
TT






TTT
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   248.250.........260.........270.........280.........290.........300.........310.........320.......
 
   299300.........310.........320.........330.........340.........350.........360.........370........
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Query Sequence  GNPLAVAAAHAVLNIIDKESLCERANQLGQRLKNTLIDAKESVPAIAAVRGLGSMIAVEFNDPQTGEPSAAIAQKIQQRA
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Template Sequence  NQPVACAAALANIELMEREGIVDQAREMADYFAAALASL. RDLPGVAETRSVGLVGCVQCLLGTA. . EDKAFTLKIDERC
Template Known Secondary structure  T
TTTT.TTSTTTT



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   328.330.........340.........350.........360...... ...370.........380.........390. ........400....
 
   379380.........390.........400.........410.........420.
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Query Sequence  LAQGLLLLTCGAYGNVIRFLYPLTIPDAQFDAAMKILQDALSD
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Template Sequence  FELGLIVRPLG. . . DLCVISPPLIISRAQIDEMVAIMRQAITE
Template Known Secondary structure  TT
T...T


TT

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   411........420. ........430.........440.........450
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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