Job Description Q5H772 Confidence 100.00% Date Thu Jan 5 12:37:18 GMT 2012 Rank 5 Aligned Residues 414 % Identity 25% Template c3hmuA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase, class iii; PDBTitle: crystal structure of a class iii aminotransferase from2 silicibacter pomeroyi Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20							.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.
Query Sequence		M	S	N	N	E	F	H	Q	R	R	L	S	A	T	P	R	G	V	G	V	.	.	.	.	.	.	M	C	N	F	F	A	Q	S	A	E	N	A	T	L	K	D	V	E	G	N	E	Y	I	D	F	A	A	G	I	A	V	L	N	T	G	H	R	H	P	D	L	V	A	A	V	E	Q	Q	L	Q	Q	F	T	H
Query Conservation																						.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.
Template Conservation
Template Sequence		M	P	T	A	E	L	Q	A	L	D	A	A	H	H	L	H	P	F	S	A	N	N	A	L	G	E	E	G	T	R	V	I	T	R	A	R	G	V	W	L	N	D	S	E	G	E	E	I	L	D	A	M	A	G	L	W	C	V	N	I	G	Y	G	R	D	E	L	A	E	V	A	A	R	Q	M	R	E	L	P	Y
Template Known Secondary structure		S																T	T	S																		B	T					T	T							T	T					T		T	T		B																	S
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		75		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.							.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure			.																																																			.	.	.	.	.	.
Query SS confidence			.																																																			.	.	.	.	.	.
Query Sequence		T	.	A	Y	Q	I	V	P	Y	E	S	Y	V	T	L	A	E	K	I	N	A	L	A	P	V	S	G	Q	A	K	T	A	F	F	T	T	G	A	E	A	V	E	N	A	V	K	I	A	R	A	H	T	.	.	.	.	.	.	G	R	P	G	V	I	A	F	S	G	G	F	H	G	R	T	Y	M	T	M	A	L
Query Conservation			.																																																			.	.	.	.	.	.
Alig confidence			.																								.																											.	.	.	.	.	.
Template Conservation																											.
Template Sequence		Y	N	T	F	F	K	T	T	H	V	P	A	I	A	L	A	Q	K	L	A	E	L	A	P	G	.	D	L	N	H	V	F	F	A	G	G	G	S	E	A	N	D	T	N	I	R	M	V	R	T	Y	W	Q	N	K	G	Q	P	E	K	T	V	I	I	S	R	K	N	A	Y	H	G	S	T	V	A	S	S	A	L
Template Known Secondary structure				S	S	S	S																	S		T	.	T								S	S																			T	T		T	T								T	T					S	S
Template Predicted Secondary structure																											.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180								.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																																			.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.
Query Sequence		T	G	K	V	A	P	Y	K	I	G	F	G	P	F	P	G	S	V	Y	H	V	P	Y	P	S	D	L	H	G	I	S	T	Q	.	.	.	.	.	.	.	D	S	L	D	A	I	E	R	L	F	K	S	D	I	E	A	K	Q	V	A	A	I	I	F	E	P	V	Q	G	E	G	G	F	N	V	A	P	K	E	L
Query Conservation																																			.	.	.	.	.	.	.
Alig confidence												.	.																						.	.	.	.	.	.	.														.
Template Conservation												.	.																																										.
Template Sequence		G	G	M	A	G	M	H	A	Q	S	.	.	G	L	I	P	D	V	H	H	I	N	Q	P	N	W	W	A	E	G	G	D	M	D	P	E	E	F	G	L	A	R	A	R	E	L	E	E	A	I	L	E	L	.	G	E	N	R	V	A	A	F	I	A	E	P	V	Q	G	A	G	G	V	I	V	A	P	D	S	Y
Template Known Secondary structure		S								T	T	.	.				S	S														T	T																						.		G	G	G								S	S	B	S	T	T	T		B				T	T
Template Predicted Secondary structure												.	.																																										.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.			.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.		.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.			.	.	.	.	.
Predicted Secondary structure																																																							.																				.	.
Query SS confidence																																																							.																				.	.
Query Sequence		V	A	A	I	R	R	L	C	D	E	H	G	I	V	M	I	A	D	E	V	Q	S	G	F	A	R	T	G	K	L	F	A	M	D	H	Y	A	D	K	P	D	L	M	T	M	A	K	S	L	A	G	G	M	.	P	L	S	G	V	V	G	N	A	N	I	M	D	A	P	A	P	G	G	.	.	L	G	G	T	Y
Query Conservation																																																							.																				.	.
Alig confidence																																																							.																				.	.
Template Conservation
Template Sequence		W	P	E	I	Q	R	I	C	D	K	Y	D	I	L	L	I	A	D	E	V	I	C	G	F	G	R	T	G	N	W	F	G	T	Q	T	M	G	I	R	P	H	I	M	T	I	A	K	G	L	S	S	G	Y	A	P	I	G	G	S	I	V	C	D	E	V	A	H	V	I	G	K	D	E	F	N	H	G	Y	T	Y
Template Known Secondary structure												T	T								T	T	T	T	T	T	T	T	S	S	S							T				S						G	G	G	T	T	T	S	S																T	T	S							T	T
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.						.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure																																																																		.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.
Query Sequence		A	G	N	P	L	A	V	A	A	A	H	A	V	L	N	I	I	D	K	E	S	L	C	E	R	A	N	Q	L	G	Q	R	L	K	N	T	L	I	D	A	K	E	S	V	P	A	I	A	A	V	R	G	L	G	S	M	I	A	V	E	F	N	D	P	.	.	.	.	.	Q	T	G	E	P	S	A	A	I	A	Q
Query Conservation																																																																		.	.	.	.	.
Alig confidence																																																																		.	.	.	.	.
Template Conservation
Template Sequence		S	G	H	P	V	A	A	A	V	A	L	E	N	L	R	I	L	E	E	E	N	I	L	D	H	V	R	N	V	A	A	P	Y	L	K	E	K	W	E	A	L	T	D	H	P	L	V	G	E	A	K	I	V	G	M	M	A	S	I	A	L	T	P	N	K	A	S	R	A	K	F	A	S	E	P	G	T	I	G	Y
Template Known Secondary structure		T	T																		T	T								T											G	G	G	G	S	T	T								T	T								S		G	G	G	T			B	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	Q	Q	R	A	L	A	Q	G	L	L	L	L	T	C	G	A	Y	G	N	V	I	R	F	L	Y	P	L	T	I	P	D	A	Q	F	D	A	A	M	K	I	L	Q	D	A	L	S	D
Query Conservation
Alig confidence																		.	.	.
Template Conservation																		.	.	.
Template Sequence		I	C	R	E	R	C	F	A	N	N	L	I	M	R	H	V	.	.	.	G	D	R	M	I	I	S	P	P	L	V	I	T	P	A	E	I	D	E	M	F	V	R	I	R	K	S	L	D	E
Template Known Secondary structure										T	T	B						.	.	.	T	T								T	T
Template Predicted Secondary structure																		.	.	.
Template SS confidence
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.				420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.