Job Description Q5H772 Confidence 99.90% Date Thu Jan 5 12:37:18 GMT 2012 Rank 148 Aligned Residues 326 % Identity 11% Template c3frkB_ PDB info PDB header:transferase Chain: B: PDB Molecule:qdtb; PDBTitle: x-ray structure of qdtb from t. thermosaccharolyticum in2 complex with a plp:tdp-3-aminoquinovose aldimine Resolution 2.15 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	E	Y	I	D	F	A	A	G	I	A	V	L	N	T	G	H	R	H	P	D	L	V	A	A	V	E	Q	Q	L	Q	Q	F	T	H	T	A	Y	Q	I	V	P	Y	E	S	Y	V	T	L	A	E	K	I	N	A	L	A	P	V	S	G	Q	A	K	T	A	F	F	T	T	G	A	E	A	V	E	N	A	V
Query Conservation
Alig confidence																.	.	.	.	.																.	.	.	.	.																				.	.	.
Template Conservation																.	.	.	.	.																.	.	.	.	.																				.	.	.
Template Sequence		K	I	S	F	A	S	F	K	P	M	H	D	E	I	.	.	.	.	.	E	Y	E	I	K	F	K	F	E	E	I	Y	K	R	N	.	.	.	.	.	W	F	I	L	G	D	E	D	K	K	F	E	Q	E	F	A	D	Y	C	.	.	.	N	V	N	Y	C	I	G	C	G	N	G	L	D	A	L	H	L	I	L
Template Known Secondary structure			B		S											.	.	.	.	.															T	.	.	.	.	.			S	S															T	.	.	.	T	S	S						S
Template Predicted Secondary structure																.	.	.	.	.																.	.	.	.	.																				.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.						.	.	.	.	20	.	.	.	.	.	.	.	.	.	30						.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.				50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	A	R	A	H	T	G	R	P	G	V	I	A	F	S	G	G	F	H	G	R	T	Y	M	T	M	A	L	T	G	K	V	A	P	Y	K	I	G	F	G	P	F	P	G	S	V	Y	H	V	P	Y	P	S	D	L	H	G	I	S	T	Q	D	S	L	D	A	I	E	R	L	F	K	S	D	I	E	A	K	Q
Query Conservation
Alig confidence					.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.
Template Conservation					.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.
Template Sequence		K	G	Y	.	.	D	I	G	F	G	D	E	V	I	V	P	S	N	T	F	I	A	T	A	L	A	V	S	Y	T	G	A	K	P	I	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	P	D	I	R	T	Y	N	I	D	P	S	L	I	E	S	A	I	T	E	K	.	.	.	.	.
Template Known Secondary structure				T	.	.	T			T	T							T	T	S											T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	T	T				G	G	G	T	G	G	G			T	T	.	.	.	.	.
Template Predicted Secondary structure					.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.
Template SS confidence
		69	70	.			.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.																		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	A	I	I	F	E	P	V	Q	G	E	G	G	F	N	V	A	P	K	E	L	V	A	A	I	R	R	L	C	D	E	H	G	I	V	M	I	A	D	E	V	Q	S	G	F	A	R	T	G	K	L	F	A	M	D	H	Y	A	D	K	P	D	L	M	T	M	A	K	S	L	A	G	G	M	P	L	S	G	V
Query Conservation
Alig confidence		.	.	.																.	.	.	.
Template Conservation		.	.	.																.	.	.	.
Template Sequence		.	.	.	T	K	A	I	I	A	V	H	L	Y	G	Q	P	A	D	.	.	.	.	M	D	E	I	K	R	I	A	K	K	Y	N	L	K	L	I	E	D	A	A	Q	A	H	G	S	L	Y	K	G	M	K	V	G	S	L	G	D	A	A	G	F	S	F	Y	P	A	K	N	L	G	S	L	G	D	G	G	A	V
Template Known Secondary structure		.	.	.									G	G	G	S				.	.	.	.											T	T								T	T		T	T				T	T			T	T	S	S	S	S								T	T	S	T	T			S	S
Template Predicted Secondary structure		.	.	.																.	.	.	.
Template SS confidence
					125	.	.	.	.	130	.	.	.	.	.	.	.	.	.					140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.												.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	G	N	A	N	I	M	D	A	P	A	P	G	G	L	G	G	T	.	.	.	.	.	.	.	.	.	.	.	Y	A	G	N	P	L	A	V	A	A	A	H	A	V	L	N	I	I	D	K	E	S	L	C	E	R	A	N	Q	L	G	Q	R	L	K	N	T	L	I	D	A	K	E	S	V	P	A	I	A	A	V
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	T	N	D	K	D	L	A	E	K	I	K	A	L	S	N	Y	G	S	E	K	K	Y	H	H	I	Y	K	G	F	N	S	R	L	D	E	L	Q	A	G	F	L	R	V	K	L	K	Y	L	D	K	W	N	E	E	R	R	K	I	A	Q	K	Y	I	A	G	I	N	N	P	N	V	I	I	P	V	E	A	D	Y
Template Known Secondary structure				S													B	T	T		S	B	T	T	B			S				B																																						B	T	T	B	B						T	T
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.																										.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	G	L	G	S	M	I	A	V	E	F	N	D	P	Q	T	G	E	P	S	A	A	I	A	Q	K	I	Q	Q	R	A	L	A	Q	G	L	L	L	L	T	C	G	A	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	V	I	R	F	L	Y	P	L	T
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.
Template Sequence		A	K	H	V	W	Y	T	F	V	I	R	S	E	K	.	.	.	.	.	.	.	.	.	R	D	E	L	Q	K	Y	L	N	N	N	G	I	G	T	L	I	H	Y	P	I	P	I	H	L	Q	Q	A	Y	K	D	L	G	F	K	T	G	N	F	P	I	A	E	K	I	A	N	E	I	L	S	I	P	I	W	Y	G
Template Known Secondary structure							S							T	T	.	.	.	.	.	.	.	.	.											T	T	B			B		S		S	S		G	G	G	S	G	G	G	G	G	G				T	T	S	S																	T	T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.	290	.										.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		403	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	D	A	Q	F	D	A	A	M	K	I	L	Q	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	K	N	E	E	I	E	Y	V	I	D	K	I	N	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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