Job Description Q5H772 Confidence 99.88% Date Thu Jan 5 12:37:18 GMT 2012 Rank 161 Aligned Residues 358 % Identity 15% Template c3f6tA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aspartate aminotransferase; PDBTitle: crystal structure of aspartate aminotransferase (e.c. 2.6.1.1)2 (yp_194538.1) from lactobacillus acidophilus ncfm at 2.15 a3 resolution Resolution 2.15 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100					.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.
Query SS confidence																																																													.	.	.	.
Query Sequence		Y	I	D	F	A	A	G	I	A	V	L	N	T	G	H	R	H	P	D	L	V	A	A	V	E	Q	Q	L	Q	Q	F	T	H	T	A	Y	Q	I	V	P	Y	E	S	Y	V	T	L	A	E	K	I	N	A	L	A	P	V	S	G	.	.	.	.	Q	A	K	T	A	F	F	T	T	G	A	E	A	V	E	N	A
Query Conservation																																																													.	.	.	.
Alig confidence																																																													.	.	.	.
Template Conservation
Template Sequence		F	L	I	D	A	V	N	Y	C	H	T	E	L	G	L	N	R	D	K	V	V	A	E	W	V	N	G	A	V	A	N	N	Y	P	V	P	D	R	C	L	V	N	T	E	K	I	I	N	Y	F	L	Q	E	L	S	Y	K	D	A	N	L	A	E	Q	T	D	L	F	P	T	E	G	G	T	A	A	I	V	Y	A
Template Known Secondary structure													T	T																	T		S			S	S	S	S																		T	T	T				G	G	G
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		118	.			120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		V	K	.	.	I	A	R	A	H	T	G	R	P	G	V	I	A	F	S	G	G	F	H	G	R	T	Y	M	T	M	A	L	T	G	K	V	A	P	Y	K	I	G	F	G	P	F	P	G	S	V	Y	H	V	P	Y	P	S	D	L	H	G	I	S	T	Q	D	S	L	D	A	I	E	R	L	F	K	S	D	I	E
Query Conservation				.	.
Alig confidence				.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.																	.										.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.																	.										.	.	.	.	.
Template Sequence		F	H	S	L	A	E	N	H	L	L	K	K	G	D	K	I	A	I	N	E	P	I	F	T	P	Y	L	R	I	P	E	L	K	D	Y	E	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	E	V	D	L	H	S	Y	E	K	N	D	W	E	I	.	E	P	N	E	I	E	K	L	K	.	.	.	.	.
Template Known Secondary structure								T	T	S	S		T	T							S	S							T	S	G	G	G	G	G	S		.	.	.	.	.	.	.	.	.	.	.	.	.										T	T	T	T	S			.									S	.	.	.	.	.
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.																	.										.	.	.	.	.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.														.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		A	K	Q	V	A	A	I	I	F	E	P	V	Q	G	E	G	G	F	N	V	A	P	K	E	L	V	A	A	I	R	R	L	C	D	E	H	.	G	I	V	M	I	A	D	E	V	Q	S	G	F	A	R	T	G	K	L	F	A	M	D	H	Y	A	D	K	P	D	L	M	T	M	A	K	S	L	A	G	G	M	P
Query Conservation																																						.
Alig confidence											.																											.
Template Conservation											.
Template Sequence		D	P	S	I	K	A	L	I	V	.	V	N	P	T	N	P	T	S	K	E	F	D	T	N	A	L	N	A	I	K	Q	A	V	E	K	N	P	K	L	X	I	I	S	D	E	V	Y	G	A	F	V	P	N	F	K	S	I	Y	S	V	V	P	Y	N	T	X	L	V	Y	S	Y	S	L	F	G	C	T	G	W	R
Template Known Secondary structure			T	T							.		S	S		T	T	T		B																		T	T								T	T	G	G	G	S	T	T								S	G	G	G											S		G	G	G
Template Predicted Secondary structure											.
Template SS confidence
		241	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		275	.	.	.	.	280	.	.	.	.	.																																						.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.
Query Sequence		L	S	G	V	V	G	N	A	N	I	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	P	A	P	G	G	L	G	G	T	Y	A	G	N	P	L	A	V	A	A	A	H	A	V	L	.	.	.	.	.	.
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.
Template Conservation
Template Sequence		L	G	V	I	A	L	N	E	K	N	V	F	D	D	N	I	A	H	L	D	K	V	E	L	R	Q	L	H	K	R	Y	S	S	V	V	L	D	P	D	K	X	K	F	I	D	R	L	C	A	D	S	R	S	I	G	L	Y	H	T	A	G	L	S	T	P	Q	Q	I	X	E	A	L	F	S	X	T	H	L	L	T
Template Known Secondary structure									S	S									T	S														T	T		S		G	G	G												T	T	T	T	T	G	G	G		S																		T	T
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
				312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.											.	.
Predicted Secondary structure		.	.																																																																			.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																																																																			.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	N	I	I	D	K	E	S	L	C	E	R	A	N	Q	L	G	Q	R	L	K	N	T	L	I	D	A	K	E	S	V	P	A	I	A	A	V	R	G	L	G	S	M	I	A	V	E	F	N	D	P	Q	T	G	E	P	S	A	A	I	A	Q	K	I	Q	Q	R	.	.	.	.	.	.	.	.	.	.	A	L
Query Conservation		.	.																																																																			.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																													.																																						.	.	.	.	.	.	.	.	.	.
Template Conservation																																.
Template Sequence		S	T	N	G	G	S	D	D	P	Y	I	D	I	A	R	K	L	V	S	E	R	Y	D	Q	L	H	D	A	X	Q	.	A	P	K	D	E	T	D	T	N	T	H	Y	Y	S	L	I	D	I	Y	R	L	A	E	K	I	Y	G	K	E	F	R	D	Y	L	T	N	N	F	E	Q	V	D	F	L	L	K	L	A	E
Template Known Secondary structure			B	G	G	G	T	B																							T	.						S	T	T	B			S
Template Predicted Secondary structure																																.
Template SS confidence
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430		.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.
		380	.	.	.	.	.	.	.	.				.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure											.	.	.
Query SS confidence											.	.	.
Query Sequence		A	Q	G	L	L	L	L	T	C	.	.	.	G	A	Y	G	N	V	I	R	F	L	Y	P	L	T	I	P	D	A	Q	F	D	A	A	M	K	I	L	Q	D	A	L	S	D
Query Conservation											.	.	.
Alig confidence											.	.	.													.
Template Conservation																										.
Template Sequence		K	N	G	V	V	L	V	D	G	V	G	F	G	A	K	P	G	E	L	R	V	S	Q	A	.	N	L	P	T	E	D	Y	A	L	I	G	K	Q	V	L	E	L	L	K	E
Template Known Secondary structure			T	T	S	S	S		T	T					S	S	T	T						S	S	.	S	S
Template Predicted Secondary structure																										.
Template SS confidence
		480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.		.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.