Job Description Q5H772 Confidence 99.76% Date Thu Jan 5 12:37:18 GMT 2012 Rank 216 Aligned Residues 324 % Identity 11% Template c3e77A_ PDB info PDB header:transferase Chain: A: PDB Molecule:phosphoserine aminotransferase; PDBTitle: human phosphoserine aminotransferase in complex with plp Resolution 2.50 Å

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		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.									.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.																											.
Query SS confidence																											.	.	.	.	.	.	.	.																											.
Query Sequence		H	P	D	L	V	A	A	V	E	Q	Q	L	Q	Q	F	T	H	T	A	Y	Q	I	V	P	Y	.	.	.	.	.	.	.	.	E	S	Y	V	T	L	A	E	K	I	N	A	L	A	P	V	S	G	Q	A	K	T	A	F	F	T	.	T	G	A	E	A	V	E	N	A	V	K	I	A	R	A	H	T	G	R	P
Query Conservation																											.	.	.	.	.	.	.	.																											.
Alig confidence																											.	.	.	.	.	.	.	.																											.
Template Conservation
Template Sequence		P	H	S	V	L	L	E	I	Q	K	E	L	L	D	Y	K	G	V	G	I	S	V	L	E	M	S	H	R	S	S	D	F	A	K	I	I	N	N	T	E	N	L	V	R	E	L	L	A	V	P	D	N	Y	K	V	I	F	L	Q	G	G	G	C	G	Q	F	S	A	V	P	L	N	L	I	G	L	K	A	G	R
Template Known Secondary structure												T	S	S	S	G	G	G	S	S	S		T	T	T			T	T	S																			T			T	T							S	S														G	G	G	S	T	T
Template Predicted Secondary structure
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	I	A	F	S	G	G	F	H	G	R	T	Y	M	T	M	A	L	T	G	K	V	A	P	Y	K	I	G	F	G	P	F	P	G	S	V	Y	H	V	P	Y	P	S	D	L	H	G	I	S	T	Q	D	S	L	D	A	I	E	R	L	F	K	S	D	I	E	A	K	Q	V	A	A	I	I	F	E	P	V	Q
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.
Template Sequence		C	A	D	Y	V	V	T	G	A	W	S	A	K	A	A	E	E	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	F	G	T	I	N	I	V	H	P	K	L	G	S	Y	T	K	I	P	D	P	S	T	W	N	L	.	.	.	.	.	.	.	.	N	P	D	A	S	Y	V	Y	Y	C	A	N	E
Template Known Secondary structure									S											T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S						S				S	S	S		S				G	G	G				.	.	.	.	.	.	.	.		T	T		S						S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.															.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.									.	.	.	.	.	.	.	150	.	.	.	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	G	G	F	N	V	A	P	K	E	L	V	A	A	I	R	R	L	C	D	E	H	G	I	V	M	I	A	D	E	V	Q	S	G	F	A	R	T	G	K	L	F	A	M	D	H	Y	A	D	K	P	D	L	M	T	M	A	K	S	L	A	G	G	M	P	L	S	G	V	V	G	N	A	N	I	M	D	A	P
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.																							.	.	.	.	.																						.
Template Conservation										.	.	.	.	.	.	.	.	.																							.	.	.	.	.																						.
Template Sequence		T	V	H	G	V	E	F	D	.	.	.	.	.	.	.	.	.	F	I	P	D	V	K	G	A	V	L	V	C	D	M	S	S	N	F	L	S	K	P	.	.	.	.	.	V	D	V	S	K	F	G	V	I	F	A	G	A	Q	K	N	V	G	S	A	G	.	V	T	V	V	I	V	R	D	D	L	L	G	F	A
Template Known Secondary structure		T	T	T	T				S	.	.	.	.	.	.	.	.	.	S					T	T								T	T	T	T	T	S	S		.	.	.	.	.			G	G	G		S						G	G	G	T	T	S		T	T	.								T	T	S		S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.																							.	.	.	.	.																						.
Template SS confidence
		156	.	.	.	160	.	.	.										.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.						.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.	.	.	.	220
		289	290													.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350						.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.																																																													.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.																																																													.	.	.	.	.
Query Sequence		A	P	.	.	.	.	.	.	.	.	.	.	.	.	G	G	L	G	G	T	Y	A	G	N	P	L	A	V	A	A	A	H	A	V	L	N	I	I	D	K	E	S	L	C	E	R	A	N	Q	L	G	Q	R	L	K	N	T	L	I	D	A	K	E	S	V	P	A	I	A	A	V	R	G	L	.	.	.	.	.	G
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.																																																													.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.																																																													.	.	.	.	.
Template Conservation
Template Sequence		L	R	E	C	P	S	V	L	E	Y	K	V	Q	A	G	N	S	S	L	Y	N	T	P	P	C	F	S	I	Y	V	M	G	L	V	L	E	W	I	K	N	N	G	G	A	A	A	M	E	K	L	S	S	I	K	S	Q	T	I	Y	E	I	I	D	N	S	Q	G	F	Y	V	C	P	V	E	P	Q	N	R	S	K
Template Known Secondary structure			T	T	S		G	G	G							T	T	T	T		S	S																				T	T																						T	S	T	T	S					S		G	G	G	B		S
Template Predicted Secondary structure
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	M	I	A	V	E	F	N	D	P	Q	T	G	E	P	S	A	A	I	A	Q	K	I	Q	Q	R	A	L	A	Q	G	L	L	L	L	T	C	G	A	Y	G	N	V	I	R	F	L	Y	P	L	T	I	P	D	A	Q	F	D	A	A	M	K	I	L	Q	D	A	L	S	D
Query Conservation
Alig confidence													.	.	.
Template Conservation													.	.	.
Template Sequence		M	N	I	P	F	R	I	G	N	A	K	.	.	.	G	D	D	A	L	E	K	R	F	L	D	K	A	L	E	L	N	M	L	S	L	K	G	H	R	S	V	G	G	I	R	A	S	L	Y	N	A	V	T	I	E	D	V	Q	K	L	A	A	F	M	K	K	F	L	E	M
Template Known Secondary structure		S							S	S	T	T	.	.	.																T	T			S		B			T	T	T		S							T	T	S
Template Predicted Secondary structure													.	.	.
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.				.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions