Job Description Q5H772 Confidence 100.00% Date Thu Jan 5 12:37:18 GMT 2012 Rank 28 Aligned Residues 387 % Identity 27% Template c3dodA_ PDB info PDB header:transferase Chain: A: PDB Molecule:adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PDBTitle: crystal structure of plp bound 7,8-diaminopelargonic acid synthase in2 bacillus subtilis Resolution 1.90 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20						.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.
Query SS confidence																			.	.	.	.	.
Query Sequence		N	E	F	H	Q	R	R	L	S	A	T	P	R	G	V	G	V	.	.	.	.	.	M	C	N	F	F	A	Q	S	A	E	N	A	T	L	K	D	V	E	G	N	E	Y	I	D	F	A	A	G	I	A	V	L	N	T	G	H	R	H	P	D	L	V	A	A	V	E	Q	Q	L	Q	Q	F	T	H	T	A	Y	Q
Query Conservation																			.	.	.	.	.
Alig confidence																			.	.	.	.	.
Template Conservation
Template Sequence		H	D	L	I	E	K	S	K	K	H	L	W	L	P	F	T	Q	M	K	D	Y	D	E	N	P	L	I	I	E	S	G	T	G	I	K	V	K	D	I	N	G	K	E	Y	Y	D	G	F	S	S	V	W	L	N	V	H	G	H	R	K	K	E	L	D	D	A	I	K	K	Q	L	G	K	I	A	H	S	T	L	L
Template Known Secondary structure															T	T									S									B	T					T	T	S						T	T					T		S	S		B	S													T	T		S					S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.							.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.
Query Sequence		I	V	P	Y	E	S	Y	V	T	L	A	E	K	I	N	A	L	A	P	V	S	G	Q	A	K	T	A	F	F	T	T	G	A	E	A	V	E	N	A	V	K	I	A	R	A	H	T	.	.	.	.	.	.	G	R	P	G	V	I	A	F	S	G	G	F	H	G	R	T	Y	M	T	M	A	L	T	G	K	V	A
Query Conservation																																																	.	.	.	.	.	.
Alig confidence																						.																											.	.	.	.	.	.
Template Conservation																						.
Template Sequence		G	M	T	N	V	P	A	T	Q	L	A	E	T	L	I	D	I	S	P	K	.	K	L	T	R	V	F	Y	S	D	S	G	A	E	A	M	E	I	A	L	K	M	A	F	Q	Y	W	K	N	I	G	K	P	E	K	Q	K	F	I	A	M	K	S	Y	K	A	P	I	P	Y	V	Y	R	S	E	S	G	D	P	D
Template Known Secondary structure		S	S																S		T	.	T								S	S																			T	T		T	T																		T	T	S	S	S
Template Predicted Secondary structure																						.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		P	Y	K	I	G	F	G	P	F	P	G	S	V	Y	H	V	P	Y	P	S	D	L	H	G	I	S	T	Q	D	S	L	D	A	I	E	R	L	F	K	S	D	I	E	A	K	Q	V	A	A	I	I	F	E	P	.	V	Q	G	E	G	G	F	N	V	A	P	K	E	L	V	A	A	I	R	R	L	C	D	E	H
Query Conservation																																																								.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.												.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Sequence		E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	R	D	Q	C	L	R	E	L	A	Q	L	L	E	E	H	.	.	H	E	E	I	A	A	L	S	I	E	S	M	V	Q	G	A	S	G	M	I	V	M	P	E	G	Y	L	A	G	V	R	E	L	C	T	T	Y
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	G	G	G								S	S			S	T	T	T						T	T												T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template SS confidence
		191																									.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.			.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.		.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290								.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure																																												.																		.	.	.	.	.	.	.
Query SS confidence																																												.																		.	.	.	.	.	.	.
Query Sequence		G	I	V	M	I	A	D	E	V	Q	S	G	F	A	R	T	G	K	L	F	A	M	D	H	Y	A	D	K	P	D	L	M	T	M	A	K	S	L	A	G	G	M	.	P	L	S	G	V	V	G	N	A	N	I	M	D	A	P	A	P	.	.	.	.	.	.	.	G	G	L	G	G	T	Y	A	G	N	P	L	A
Query Conservation																																												.																		.	.	.	.	.	.	.
Alig confidence																																												.																		.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	V	L	M	I	V	D	E	V	A	T	G	F	G	R	T	G	K	M	F	A	C	E	H	E	N	V	Q	P	D	L	M	A	A	G	K	G	I	T	G	G	Y	L	P	I	A	V	T	F	A	T	E	D	I	Y	K	A	F	Y	D	D	Y	E	N	L	K	T	F	F	H	G	H	S	Y	T	G	N	Q	L	G
Template Known Secondary structure		T								T	T	T	T	T	T	T	T	S	S	S	S	G	G	G	G	G	T				S						G	G	G	G	T	T	S	S														T	T		S		G	G	G									T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.					.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.
Query SS confidence																																																												.	.	.	.
Query Sequence		V	A	A	A	H	A	V	L	N	I	I	D	K	E	S	L	C	E	R	A	N	Q	L	G	Q	R	L	K	N	T	L	I	D	A	K	E	S	V	P	A	I	A	A	V	R	G	L	G	S	M	I	A	V	E	F	N	D	P	.	.	.	.	Q	T	G	E	P	S	A	A	I	A	Q	K	I	Q	Q	R	A	L
Query Conservation																																																												.	.	.	.
Alig confidence																																					.																							.	.	.	.
Template Conservation																																					.
Template Sequence		C	A	V	A	L	E	N	L	A	L	F	E	S	E	N	I	V	E	Q	V	A	E	K	S	K	K	L	H	F	L	L	Q	D	L	H	.	A	L	P	H	V	G	D	I	R	Q	L	G	F	M	C	G	A	E	L	V	R	S	K	E	T	K	E	P	Y	P	A	D	R	R	I	G	Y	K	V	S	L	K	M	R
Template Known Secondary structure															T	T																				T	.	T	S	T	T								T	T								S	B	T	T	T	T	B				G	G	G
Template Predicted Secondary structure																																					.
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	G	L	L	L	L	T	C	G	A	Y	G	N	V	I	R	F	L	Y	P	L	T	I	P	D	A	Q	F	D	A	A	M	K	I	L	Q	D	A	L	S	D
Query Conservation
Alig confidence												.	.	.
Template Conservation												.	.	.
Template Sequence		E	L	G	M	L	T	R	P	L	G	.	.	.	D	V	I	A	F	L	P	P	L	A	S	T	A	E	E	L	S	E	M	V	A	I	M	K	Q	A	I	H	E
Template Known Secondary structure			T	T							T	.	.	.	T								T	T
Template Predicted Secondary structure												.	.	.
Template SS confidence
		404	.	.	.	.	.	410	.	.	.				.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.