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Job DescriptionQ5H772
Confidence100.00%DateThu Jan 5 12:37:18 GMT 2012
Rank28Aligned Residues387
% Identity27%Templatec3dodA_
PDB info PDB header:transferaseChain: A: PDB Molecule:adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PDBTitle: crystal structure of plp bound 7,8-diaminopelargonic acid synthase in2 bacillus subtilis
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20 .........30.........40.........50.........60.........70........
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Query Sequence  NEFHQRRLSATPRGVGV. . . . . MCNFFAQSAENATLKDVEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAYQ
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Template Sequence  HDLIEKSKKHLWLPFTQMKDYDENPLIIESGTGIKVKDINGKEYYDGFSSVWLNVHGHRKKELDDAIKKQLGKIAHSTLL
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TT

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BTTTS
TTT
SS
BS
TT
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S
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   7980.........90.........100.........110.........120..... ....130.........140.........150..
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Query Sequence  IVPYESYVTLAEKINALAPVSGQAKTAFFTTGAEAVENAVKIARAHT. . . . . . GRPGVIAFSGGFHGRTYMTMALTGKVA
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Template Sequence  GMTNVPATQLAETLIDISPK. KLTRVFYSDSGAEAMEIALKMAFQYWKNIGKPEKQKFIAMKSYKAPIPYVYRSESGDPD
Template Known Secondary structure  SS

S
T.TSSTT
TT








TTSSS

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   83......90.........100.. .......110.........120.........130.........140.........150.........160.
 
   153......160.........170.........180.........190.........200...... ...210.........220.........230.
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Query Sequence  PYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAIIFEP. VQGEGGFNVAPKELVAAIRRLCDEH
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Template Sequence  E. . . . . . . . . . . . . . . . . . . . . . . . CRDQCLRELAQLLEEH. . HEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTY
Template Known Secondary structure  ..........................GGGSSSTTT


TTT
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   191 ........200....... ..210.........220.........230.........240....
 
   232.......240.........250.........260.........270... ......280.........290 .........300...
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Query Sequence  GIVMIADEVQSGFARTGKLFAMDHYADKPDLMTMAKSLAGGM. PLSGVVGNANIMDAPAP. . . . . . . GGLGGTYAGNPLA
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Template Sequence  DVLMIVDEVATGFGRTGKMFACEHENVQPDLMAAGKGITGGYLPIAVTFATEDIYKAFYDDYENLKTFFHGHSYTGNQLG
Template Known Secondary structure  T

TTTTTTTTSSSSGGGGGT


S
GGGGTTSS

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   245....250.........260.........270.........280.........290.........300.........310.........320....
 
   304.....310.........320.........330.........340.........350.........360. ........370.........
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Query Sequence  VAAAHAVLNIIDKESLCERANQLGQRLKNTLIDAKESVPAIAAVRGLGSMIAVEFNDP. . . . QTGEPSAAIAQKIQQRAL
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Template Sequence  CAVALENLALFESENIVEQVAEKSKKLHFLLQDLH. ALPHVGDIRQLGFMCGAELVRSKETKEPYPADRRIGYKVSLKMR
Template Known Secondary structure  TTT.TSTTTT
SBTTTTB


GGG
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   325....330.........340.........350......... 360.........370.........380.........390.........400...
 
   380.........390.........400.........410.........420.
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Query Sequence  AQGLLLLTCGAYGNVIRFLYPLTIPDAQFDAAMKILQDALSD
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Template Sequence  ELGMLTRPLG. . . DVIAFLPPLASTAEELSEMVAIMKQAIHE
Template Known Secondary structure  TT

T...T


TT

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   404.....410... ......420.........430.........440..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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