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Job DescriptionQ5H772
Confidence99.96%DateThu Jan 5 12:37:18 GMT 2012
Rank77Aligned Residues347
% Identity17%Templatec3cbfA_
PDB info PDB header:transferaseChain: A: PDB Molecule:alpha-aminodipate aminotransferase; PDBTitle: crystal structure of lysn, alpha-aminoadipate2 aminotransferase, from thermus thermophilus hb27
Resolution1.67 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50........ .60.........70.........80.........90.........100.........110......
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Query Sequence  EGNEYIDFAAGIAVLNTGHRH. PDLVAAVEQQLQQFTHTAYQIVPYESYVTLAEKINALAPVSGQAKTAFFTTGAEAVEN
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Template Sequence  QRPGILSFAGG. . LPAPELFPKEEAAEAAARILREKGEVALQYSPTEGYAPLRAFVAEWIGV. RPEEVLITTGSQQALDL
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   30.........40 .........50.........60.........70.........80......... 90.........100......
 
   117..120.........130.........140.........150.........160.........170.........180.........190......
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Query Sequence  AVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEA
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Template Sequence  VGKVF. . . LDEGSPVLLEAPSYMGAIQAFRLQGPRFLTVPA. . . . . . . . . . . . . . . . . . . GEEGPDLDALEEVLKR. . . .
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   107..110. ........120.........130.........140.... .....150.........160
 
   197..200.........210.........220.........230.........240.........250. ........260.........
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Query Sequence  KQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLF. . . . . . . AMDHYADKPDLMTMAKSL
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Template Conservation                
 
          
           
 
                                
     
Template Sequence  ERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVL
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   161........170.........180.........190.........200.........210.........220.........230.........240
 
   270.........280.........290.........300.........310.........320.........330.........340.........
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Query Sequence  AGGMPLSGVVGNANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKESLCERANQLGQRLKNTLIDAKESVPAIAAVRG
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Template Sequence  SPGLRVAFAVAHPEALQKLVQAKQGADLHTPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDREVPKEVRYTR
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   241........250.........260.........270.........280.........290.........300.........310.........320
 
   350 .........360.........370.........380........ .390.........400.........410.........420.
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Query Sequence  L. . GSMIAVEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTC. . . . . . GAYGNVIRFLYPLTIPDAQFDAAMKILQDALSD
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Template Sequence  PKGGMFVWMELPKGLS. . . . . . . AEGLFRRALEENVAFVPGGPFFANGGGENTLRLSYA. TLDREGIAEGVRRLGRALKG
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   321........330...... ...340.........350.........360.........370.. .......380.........390..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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