Job Description Q5H772 Confidence 100.00% Date Thu Jan 5 12:37:18 GMT 2012 Rank 17 Aligned Residues 402 % Identity 24% Template c3bs8A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:glutamate-1-semialdehyde 2,1-aminomutase; PDBTitle: crystal structure of glutamate 1-semialdehyde aminotransferase2 complexed with pyridoxamine-5'-phosphate from bacillus subtilis Resolution 2.30 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20										.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.
Query Sequence		N	N	E	F	H	Q	R	R	L	S	A	T	P	R	G	V	G	V	.	.	.	.	.	.	.	.	.	M	C	N	F	F	A	Q	S	A	E	N	A	T	L	K	D	V	E	G	N	E	Y	I	D	F	A	A	G	I	A	V	L	N	T	G	H	R	H	P	D	L	V	A	A	V	E	Q	Q	L	Q	Q	F	T
Query Conservation																				.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	K	T	A	F	K	E	A	Q	K	L	M	P	G	G	V	N	S	P	V	R	A	F	K	S	V	D	M	D	P	I	F	M	E	R	G	K	G	S	K	I	F	D	I	D	G	N	E	Y	I	D	Y	V	L	S	W	G	P	L	I	L	G	H	T	N	D	R	V	V	E	S	L	K	K	V	A	E	Y	G	T
Template Known Secondary structure											T	T	S	G	G	G	S	S	S	G	G	G	G		T	T	T	T	S										B	T					T	T							S	S	G	G	G	T	T		T	T		B	S																S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	T	A	Y	Q	I	V	P	Y	E	S	Y	V	T	L	A	E	K	I	N	A	L	A	P	V	S	G	Q	A	K	T	A	F	F	T	T	G	A	E	A	V	E	N	A	V	K	I	A	R	A	H	T	G	R	P	G	V	I	A	F	S	G	G	F	H	G	R	T	Y	M	T	M	A	L	T	G	K	V	A	P
Query Conservation
Alig confidence			.	.	.																					.	.
Template Conservation			.	.	.																					.	.
Template Sequence		S	.	.	.	F	G	A	P	T	E	V	E	N	E	L	A	K	L	V	I	D	R	V	P	.	.	S	V	E	I	V	R	M	V	S	S	G	T	E	A	T	M	S	A	L	R	L	A	R	G	Y	T	G	R	N	K	I	L	K	F	E	G	C	Y	H	G	H	G	D	S	L	L	I	K	A	G	S	G	V	A
Template Known Secondary structure			.	.	.		S	S																S	T	.	.	T		S						S																		T									T					S		G	G	G						S	S	S	S
Template Predicted Secondary structure			.	.	.																					.	.
Template SS confidence
		87				.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	K	I	G	F	G	P	F	P	G	S	V	Y	H	V	P	Y	P	S	D	L	H	G	I	S	T	Q	D	S	L	D	A	I	E	R	L	F	K	S	D	I	E	A	K	Q	V	A	A	I	I	F	E	P	V	Q	G	E	G	G	F	N	V	A	P	K	E	L	V	A	A	I	R	R	L	C	D	E	H	G	I
Query Conservation
Alig confidence			.	.	.	.																																				.	.
Template Conservation			.	.	.	.																																				.	.
Template Sequence		T	.	.	.	.	L	G	L	P	D	S	P	G	V	P	E	G	I	A	K	N	T	I	T	V	P	Y	N	D	L	E	S	V	K	L	A	F	Q	Q	F	.	.	G	E	D	I	A	G	V	I	V	E	P	V	A	G	N	M	G	V	V	P	P	Q	E	G	F	L	Q	G	L	R	D	I	T	E	Q	Y	G	S
Template Known Secondary structure			.	.	.	.	B				S	S	T	T			T	T	S	S	T	T						T	T													.	.	G	G	G								S	S	B		S	S	S		B				T	T													T
Template Predicted Secondary structure			.	.	.	.																																				.	.
Template SS confidence
		162					.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.			.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.				.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure																																																												.	.	.
Query SS confidence																																																												.	.	.
Query Sequence		V	M	I	A	D	E	V	Q	S	G	F	A	R	T	G	K	L	F	A	M	D	H	Y	A	D	K	P	D	L	M	T	M	A	K	S	L	A	G	G	M	P	L	S	G	V	V	G	N	A	N	I	M	D	A	P	A	P	G	.	.	.	G	L	G	G	T	Y	A	G	N	P	L	A	V	A	A	A	H	A	V
Query Conservation																																																												.	.	.
Alig confidence												.																																																.	.	.
Template Conservation												.
Template Sequence		L	L	I	F	D	E	V	M	T	G	.	F	R	V	D	Y	N	C	A	Q	G	Y	F	G	V	T	P	D	L	T	C	L	G	K	V	I	G	G	G	L	P	V	G	A	Y	G	G	K	A	E	I	M	E	Q	I	A	P	S	G	P	I	Y	Q	A	G	T	L	S	G	N	P	L	A	M	T	A	G	L	E	T
Template Known Secondary structure								T	T	T	T	.	T	T	T	S	T	T						T	T				S						G	G	G	G	T	T	S	S												T	T	B	T	T	T	S	S	B					S	S	T	T
Template Predicted Secondary structure												.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.							.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.
Query Sequence		L	N	I	I	D	K	E	S	L	C	E	R	A	N	Q	L	G	Q	R	L	K	N	T	L	I	D	A	K	E	S	V	P	A	I	A	A	V	R	G	L	G	S	M	I	A	V	E	F	N	D	P	Q	T	.	.	.	.	.	.	G	E	P	S	A	A	I	A	Q	K	I	Q	Q	R	A	L	A	Q	G	L	L
Query Conservation																																																							.	.	.	.	.	.
Alig confidence							.																																																.	.	.	.	.	.
Template Conservation							.
Template Sequence		L	K	Q	L	T	.	P	D	S	Y	K	N	F	I	K	K	G	D	R	L	E	E	G	I	S	K	A	A	E	A	H	G	I	P	H	T	F	N	R	A	G	S	M	I	G	F	F	F	T	N	E	P	V	I	N	Y	E	T	A	K	A	S	D	L	K	L	F	A	S	Y	Y	K	G	M	A	N	E	G	V	F
Template Known Secondary structure				T			.																									T	T									T	T						S	S	S	S				S					T	T	S															T	T
Template Predicted Secondary structure							.
Template SS confidence
		315	.	.	.	.		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	T	C	G	A	Y	G	N	V	I	R	F	L	Y	P	L	T	I	P	D	A	Q	F	D	A	A	M	K	I	L	Q	D	A	L	S	D
Query Conservation
Alig confidence									.	.	.	.
Template Conservation									.	.	.	.
Template Sequence		L	P	P	S	Q	F	E	.	.	.	.	G	L	F	L	S	T	A	H	T	D	E	D	I	E	N	T	I	Q	A	A	E	K	V	F	A	E
Template Known Secondary structure				S	S	S	S	S	.	.	.	.		B				T	T
Template Predicted Secondary structure									.	.	.	.
Template SS confidence
		394	.	.	.	.	.	400					.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.