Job Description Q5H772 Confidence 99.96% Date Thu Jan 5 12:37:18 GMT 2012 Rank 68 Aligned Residues 363 % Identity 15% Template c3b46B_ PDB info PDB header:transferase Chain: B: PDB Molecule:aminotransferase bna3; PDBTitle: crystal structure of bna3p, a putative kynurenine2 aminotransferase from saccharomyces cerevisiae Resolution 2.00 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.						100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																																																																		.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.
Query Sequence		D	V	E	G	N	E	Y	I	D	F	A	A	G	I	A	V	L	N	T	G	H	R	H	P	D	L	V	A	A	V	E	Q	Q	L	Q	Q	F	T	H	T	A	Y	Q	I	V	P	Y	E	S	Y	V	T	L	A	E	K	I	N	A	L	A	P	V	S	.	.	.	.	.	G	Q	A	K	T	A	F	F	T	T	G
Query Conservation																																																																		.	.	.	.	.
Alig confidence															.	.							.																			.	.																							.	.	.	.	.
Template Conservation															.	.							.																			.	.
Template Sequence		N	N	Q	G	R	E	L	I	N	L	G	Q	G	.	.	F	F	S	Y	S	P	.	P	Q	F	A	I	K	E	A	Q	K	A	L	D	I	P	M	V	N	.	.	Q	Y	S	P	T	R	G	R	P	S	L	I	N	S	L	I	K	L	Y	S	P	I	Y	N	T	E	L	K	A	E	N	V	T	V	T	T	G	A
Template Known Secondary structure				T	T	S									.	.	S		S	S			.												T	T	S	G	G	G	G	.	.	S				T	T																	T	T	S				G	G	G					S
Template Predicted Secondary structure															.	.							.																			.	.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.			.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	A	V	E	N	A	V	K	I	A	R	A	H	T	G	R	P	G	V	I	A	F	S	G	G	F	H	G	R	T	Y	M	T	M	A	L	T	G	K	V	A	P	Y	K	I	G	F	G	P	F	P	G	S	V	Y	H	V	P	Y	P	S	D	L	H	G	I	S	T	Q	D	S	L	D	A	I	E	R	L	F
Query Conservation
Alig confidence									.	.	.																																																							.	.	.	.	.	.
Template Conservation									.	.	.																																																							.	.	.	.	.	.
Template Sequence		N	E	G	I	L	S	C	.	.	.	L	M	G	L	L	N	A	G	D	E	V	I	V	F	E	P	F	F	D	Q	Y	I	P	N	I	E	L	C	G	G	K	V	V	Y	V	P	I	N	P	P	K	E	L	D	Q	R	N	T	R	G	E	E	W	T	.	.	.	.	.	.	I	D	F	E	Q	F	E	K	A	I
Template Known Secondary structure									.	.	.							T	T								S			T	T								T	T												T	T	T	T	T	S		B		G	G	G	S		.	.	.	.	.	.									T
Template Predicted Secondary structure									.	.	.																																																							.	.	.	.	.	.
Template SS confidence
		125	.	.	.	.	130	.				.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.							.	.	.	.	190	.	.	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.						.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.
Query Sequence		K	S	D	I	E	A	K	Q	V	A	A	I	I	F	E	P	V	Q	G	E	G	G	F	N	V	A	P	K	E	L	V	A	A	I	R	R	L	C	D	E	H	G	I	V	M	I	A	D	E	V	Q	S	G	F	A	R	T	G	K	L	F	A	M	.	.	.	.	.	D	H	Y	A	D	K	P	D	L	M	T	M
Query Conservation																																																																	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																																																										.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	T	S	K	T	K	A	V	I	I	N	T	P	H	N	P	I	G	K	V	F	T	R	E	E	L	T	T	L	G	N	I	C	V	K	H	N	V	V	I	I	S	D	E	V	Y	E	H	L	Y	F	T	D	S	F	T	R	I	A	T	L	S	P	E	I	G	Q	L	T	L	T	V	G	S	A
Template Known Secondary structure		.	.	.	.	.	.		T	T								S	S		T	T	T																				T								T	T	T	T		B		S	S					G	G	G	S						T	T
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		A	K	S	L	A	G	G	M	P	L	S	G	V	V	G	.	N	A	N	I	M	D	A	P	A	P	G	G	L	G	G	T	Y	A	G	N	P	L	A	V	A	A	A	H	A	V	L	N	I	I	D	K	E	S	L	C	E	R	A	N	Q	L	G	Q	R	L	K	N	T	L	I	D	A	K	E	S	V	P	A	I
Query Conservation																	.
Alig confidence																	.
Template Conservation
Template Sequence		G	S	F	A	A	T	G	W	R	I	G	W	V	L	S	L	N	A	E	L	L	S	Y	A	A	K	A	H	T	R	I	C	F	A	S	P	S	P	L	Q	E	A	C	A	N	S	I	N	D	A	L	K	I	G	Y	F	E	K	M	R	Q	E	Y	I	N	K	F	K	I	F	T	S	I	F	D	E	L	G	L	P
Template Known Secondary structure					S		T	T	S								S																T	S	S																				T																								T
Template Predicted Secondary structure
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.										.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.										.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Query Sequence		A	A	V	R	G	L	G	S	M	I	A	V	E	F	N	D	P	Q	T	G	E	P	.	.	.	.	.	.	.	.	.	S	A	A	I	A	Q	K	I	Q	Q	R	A	L	A	Q	G	L	L	L	L	T	C	G	A	Y	.	.	.	.	.	.	.	.	.	G	N	V	I	R	F	L	Y	P	L	T	I	P	D	A
Query Conservation																								.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.							.	.
Template Conservation																																																																									.	.
Template Sequence		Y	T	A	P	E	G	T	Y	F	V	L	V	D	F	S	K	V	K	I	P	E	D	Y	P	Y	P	E	E	I	L	N	K	G	K	D	F	R	I	S	H	W	L	I	N	E	L	G	V	V	A	I	P	P	T	E	F	Y	I	K	E	H	E	K	A	A	E	N	L	L	R	F	.	.	A	V	C	K	D	D	A
Template Known Secondary structure						S	B	S	S							T	T	S				T	T					G	G	G	T	S	S																			B		G	G	G	G	S		G	G	G	G	G	G	G	T	T					.	.				S
Template Predicted Secondary structure																																																																									.	.
Template SS confidence
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.			.	.	.	.	.	.	.
		407	.	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	F	D	A	A	M	K	I	L	Q	D	A	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	L	E	N	A	V	E	R	L	K	L	L	K	D
Template Known Secondary structure											G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		429	430	.	.	.	.	.	.	.	.	.	440	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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