Job Description Q5H772 Confidence 99.72% Date Thu Jan 5 12:37:18 GMT 2012 Rank 223 Aligned Residues 313 % Identity 16% Template c1c4kA_ PDB info PDB header:lyase Chain: A: PDB Molecule:protein (ornithine decarboxylase); PDBTitle: ornithine decarboxylase mutant (gly121tyr) Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		P	Y	E	S	Y	V	T	L	A	E	K	I	N	A	L	A	P	V	S	G	Q	A	K	T	A	F	F	T	T	G	A	E	A	V	E	N	A	V	K	I	A	R	A	H	T	G	R	P	G	V	I	A	F	S	G	G	F	H	G	R	T	Y	M	.	T	M	A	L	T	G	K	V	A	P	Y	K	I	G	F	G
Query Conservation																																																																	.
Alig confidence																		.	.	.																			.	.																									.
Template Conservation																		.	.	.																			.	.
Template Sequence		H	E	G	P	A	V	A	A	E	K	H	A	A	R	V	Y	.	.	.	N	A	D	K	T	Y	F	V	L	G	G	S	S	N	A	N	N	T	.	.	V	T	S	A	L	V	S	N	G	D	L	V	L	F	D	R	N	N	H	K	S	V	Y	N	S	A	L	A	M	A	G	G	R	P	V	Y	L	Q	T	N	R
Template Known Secondary structure		T	B	T													T	.	.	.	T		S						S	S									.	.								T	T							T	T										T	T	T	T
Template Predicted Secondary structure																		.	.	.																			.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.				.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.							.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.
Query Sequence		P	F	P	G	S	V	Y	H	V	P	Y	P	S	D	L	H	G	I	S	T	Q	D	S	L	D	A	I	E	R	L	F	K	S	D	I	E	A	.	.	.	.	.	.	K	Q	V	A	A	I	I	F	E	P	V	Q	G	E	G	G	F	N	V	A	P	K	E	L	V	A	A	I	R	R	L	C	D	E	H	G	I
Query Conservation																																							.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.																.	.	.	.	.	.														.	.						.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.																																			.	.						.	.	.	.
Template Sequence		N	P	Y	G	F	I	G	G	I	Y	D	S	D	F	.	.	.	.	.	.	.	.	D	E	K	K	I	R	E	L	A	A	K	V	D	P	E	R	A	K	W	K	R	P	F	R	L	A	V	I	Q	L	G	T	Y	D	.	.	G	T	I	Y	N	.	.	.	.	A	H	E	V	V	K	R	I	G	H	L	C	D
Template Known Secondary structure			T	T								G	G	G	S	.	.	.	.	.	.	.	.									T	T	T	S	S					T		S			B	S						S	B		T	T	.	.	S					.	.	.	.									G	G	G	B	S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.																																			.	.						.	.	.	.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.									260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.			.	.	.	.	.					.	300	.	.	.	.	.	.	.	.	.	310	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.					.	.	250	.	.	.	.	.	.	.	.	.	260	.					.	.	.	.	.			.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.											.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure																.	.	.	.															.	.	.	.						.	.																		.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.															.	.	.	.						.	.																		.	.	.	.	.	.	.	.	.	.
Query Sequence		V	M	I	A	D	E	V	Q	S	G	F	A	R	T	.	.	.	.	G	K	L	F	A	M	D	H	Y	A	D	K	P	D	.	.	.	.	L	M	T	M	A	.	.	K	S	L	A	G	G	M	P	L	S	G	V	V	G	N	A	N	.	.	.	.	.	.	.	.	.	.	I	M	D	A	P	A	P	G	G	L
Query Conservation																.	.	.	.															.	.	.	.						.	.																		.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.															.	.	.	.						.	.																		.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	I	E	F	D	S	A	W	V	G	Y	E	Q	F	I	P	M	M	R	N	S	S	P	L	L	I	D	D	L	G	P	E	D	P	G	I	I	V	V	Q	S	V	H	K	Q	Q	A	G	F	S	Q	T	S	Q	I	H	K	K	D	S	H	I	K	G	Q	L	R	Y	C	D	H	K	H	F	N	N	S	F	N	L
Template Known Secondary structure								T	T			G	G	G	S	S	G	G	G	G	G	G		T	T	S						T	T	S													S	S			T	T									G	G	G	T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.				.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	G	T	Y	A	G	N	P	L	A	V	A	A	A	H	A	V	L	N	I	I	D	.	.	.	K	E	S	L	C	E	R	A	N	Q	L	G	Q	R	L	K	N	T	L	I	D	A	K	E	S	V	P	A	I	A	A	V	R	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																								.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	M	S	T	S	P	F	Y	P	M	Y	A	A	L	D	V	N	A	A	M	Q	E	G	E	A	G	R	K	L	W	H	D	L	L	I	T	T	I	E	A	R	K	K	L	I	K	A	G	S	M	F	R	P	F	V	P	P	V	V	N	G	K	K	W	E	D	G	D	T	E	D	M	A	N	N	I	D	Y	W	R
Template Known Secondary structure			S		S	S																	S																									T	T		S	S			S	S		S			T	T			G	G	G	S						T	T		G	G	G	G	B
Template Predicted Secondary structure
Template SS confidence
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.
																						350	.	.	.	.	.	.	.	.	.	360									.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	S	M	I	A	V	E	F	N	D	.	.	.	.	.	.	.	.	P	Q	T	G	E	P	S	A	A	I	A	Q	K	I	Q	Q	R	A	L	A	Q	G	L	L	L	L	T	C	G	A	Y	G	N	V	I	R	F	L	Y	P	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.							.	.	.	.																				.	.
Template Conservation																																															.	.	.	.																				.	.
Template Sequence		F	E	K	G	A	K	W	H	A	Y	E	G	Y	G	D	N	Q	Y	Y	V	D	P	N	K	F	M	L	T	T	P	G	I	N	P	E	T	G	D	Y	E	D	F	G	V	P	.	.	.	.	A	T	I	V	A	N	Y	L	R	D	H	G	I	I	P	E	K	S	D	.	.	L	N	S	I	L	F	L	M	T	P
Template Known Secondary structure				T	T		T	T	T			T	T			T	T						T	T							S	S			T	T	T	T				S	S				.	.	.	.											T	T				S				.	.	S	S								T
Template Predicted Secondary structure																																															.	.	.	.																				.	.
Template SS confidence
		472	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.					.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.			.	.	.	.	540	.	.	.	.	.
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	P	D	A	Q	F	D	A	A	M	K	I	L	Q	D	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	T	P	A	K	M	N	N	L	I	T	Q	L	L	Q	L
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		546	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions