Job Description P0AFE8 Confidence 9.12% Date Thu Jan 5 11:26:03 GMT 2012 Rank 78 Aligned Residues 86 % Identity 16% Template d3dtub2 SCOP info Transmembrane helix hairpin Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region Resolution 2.15

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		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	M	P	G	T	G	N	F	V	G	E	F	M	I	L	F	G	S	F	Q	V	V	P	V	I	T	V	I	S	T	F	G	L	V	F	A	S	V	Y	S	L	A	M	L	H	R	A	Y	F	G	K	A	K	S	Q	I	A	S	Q	E	L	P	G	M	S	L	R	E	L	F	M	I	L	L	L	V	V	L	L	V
Query Conservation
Alig confidence																		.	.	.	.																			.	.	.	.
Template Conservation																		.	.	.	.																			.	.	.	.
Template Sequence		G	F	Q	P	S	A	S	P	V	A	T	Q	I	H	W	L	.	.	.	.	D	G	F	I	L	V	I	I	A	A	I	T	I	F	V	T	L	L	.	.	.	.	I	L	Y	A	V	W	R	F	H	E	K	R	N	K	V	P	A	R	F	T	H	N	S	P	L	E	I	A	W	T	I	V	P	I	V	I	L	V
Template Known Secondary structure		S						S										.	.	.	.																			.	.	.	.										T	T	T			S
Template Predicted Secondary structure																		.	.	.	.																			.	.	.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.					.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.					.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		477	.	.	480	.	.	.	.	.	.	.	.	.	490
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	G	F	Y	P	Q	P	I	L	D	T	S	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	G	A	F	S	L	P	V	L	F	N	Q	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions