Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFE8
Confidence8.87%DateThu Jan 5 11:26:03 GMT 2012
Rank90Aligned Residues30
% Identity20%Templatec2kseA_
PDB info PDB header:transferaseChain: A: PDB Molecule:sensor protein qsec; PDBTitle: backbone structure of the membrane domain of e. coli2 histidine kinase receptor qsec, center for structures of3 membrane proteins (csmp) target 4311c
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   86...90.........100.........110.....
Predicted Secondary structure 





Query SS confidence 





























Query Sequence  LSLLMVVLTGLLGVLAVLCSWKEIEKYQGF
Query Conservation 

         
                  
Alig confidence 





























Template Conservation 







 



  





  






Template Sequence  LTLIFLILASVTWLLSSFVAWKQTTDNWEY
Template Known Secondary structure  SS


S



S
Template Predicted Secondary structure 



Template SS confidence 





























   14.....20.........30.........40...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions