Job Description P77747 Confidence 100.00% Date Thu Jan 5 12:32:27 GMT 2012 Rank 4 Aligned Residues 330 % Identity 62% Template d2zfga1 SCOP info Transmembrane beta-barrels Porins Porin Resolution 1.59

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.					.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.			.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.																																	.	.
Query SS confidence																																		.	.	.	.																																	.	.
Query Sequence		A	E	V	Y	N	K	D	G	N	K	L	D	L	Y	G	K	V	D	G	L	H	Y	F	S	D	N	S	A	K	D	G	D	.	.	.	.	Q	S	Y	A	R	L	G	F	K	G	E	T	Q	I	N	D	Q	L	T	G	Y	G	Q	W	E	Y	N	I	Q	A	N	N	.	.	T	E	S	S	K	N	Q	S	W	T
Query Conservation																																		.	.	.	.																																	.	.
Alig confidence																																		.	.	.	.																																	.	.
Template Conservation
Template Sequence		A	E	I	Y	N	K	D	G	N	K	V	D	L	Y	G	K	A	V	G	L	H	Y	F	S	K	G	G	E	N	S	Y	G	G	N	G	D	M	T	Y	A	R	L	G	F	K	G	E	T	Q	I	N	S	D	L	T	G	Y	G	Q	W	E	Y	N	F	Q	G	N	N	S	E	G	A	D	A	Q	T	G	N	K	T
Template Known Secondary structure								T	T																				T	T	B	S	S		S																	S	S	S													S	S	S		S	S	T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	A	F	A	G	L	K	F	A	D	Y	G	S	F	D	Y	G	R	N	Y	G	V	M	Y	D	I	E	G	W	T	D	M	L	P	E	F	G	G	D	S	Y	T	N	A	D	N	F	M	T	G	R	A	N	G	V	A	T	Y	R	N	T	D	F	F	G	L	V	N	G	L	N	F	A	V	Q	Y	Q	G	N
Query Conservation
Alig confidence																																																				.
Template Conservation																																																				.
Template Sequence		R	L	A	F	A	G	L	K	Y	A	D	V	G	S	F	D	Y	G	R	N	Y	G	V	V	Y	D	A	L	G	Y	T	D	M	L	P	E	F	G	G	D	T	A	Y	S	D	D	F	F	V	G	.	R	V	G	G	V	A	T	Y	R	N	S	N	F	F	G	L	V	D	G	L	N	F	A	V	Q	Y	L	G	K
Template Known Secondary structure											T	T	T											T	T					T	T	T				S	S	S			T	T			T	T	S	T	T	S	S	.											S					T	S	T	T
Template Predicted Secondary structure																																																				.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	E	G	A	S	N	G	Q	E	G	T	N	N	G	R	D	V	R	H	E	N	G	D	G	W	G	L	S	T	T	Y	D	L	G	M	G	F	S	A	G	A	A	Y	T	S	S	D	R	T	N	D	Q	V	N	H	T	A	A	G	G	D	K	A	D	A	W	T	A	G	L	K	Y	D	A	N	N	I	Y	L	A
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.																		.
Template Sequence		N	E	R	D	T	A	.	.	.	.	.	.	.	.	.	.	.	R	R	S	N	G	D	G	V	G	G	S	I	S	Y	E	Y	E	.	G	F	G	I	V	G	A	Y	G	A	A	D	R	T	N	L	Q	E	A	Q	P	L	G	N	G	K	K	A	E	Q	W	A	T	G	L	K	Y	D	A	N	N	I	Y	L	A
Template Known Secondary structure		B			S	S	S	.	.	.	.	.	.	.	.	.	.	.	T	T		B													T	.	T																		T	S	S	B				S														T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.																		.
Template SS confidence
		161	.	.	.	.	.												.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		256	.	.	.	260	.	.	.	.	.	.	.	.				.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure															.	.	.
Query SS confidence															.	.	.
Query Sequence		T	M	Y	S	E	T	R	N	M	T	P	F	G	.	.	.	D	S	D	Y	A	V	A	N	K	T	Q	N	F	E	V	T	A	Q	Y	Q	F	D	F	G	L	R	P	A	V	S	F	L	M	S	K	G	R	D	L	H	A	A	G	G	A	D	N	P	A	G	V	D	D	K	D	L	V	K	Y	A	D	I	G	A
Query Conservation															.	.	.
Alig confidence															.	.	.																																																	.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.
Template Sequence		A	N	Y	G	E	T	R	N	A	T	P	I	T	N	K	F	T	N	T	S	G	F	A	N	K	T	Q	D	V	L	L	V	A	Q	Y	Q	F	D	F	G	L	R	P	S	I	A	Y	T	K	S	K	A	K	D	V	E	G	I	G	D	V	D	L	V	.	.	.	.	.	.	.	.	.	N	Y	F	E	V	G	A
Template Known Secondary structure									S		S					T	T	T	T						S														T	T	S																T	T	T							.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.										.	.	.	.	.	.	.
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Y	Y	F	N	K	N	M	S	T	Y	V	D	Y	K	I	N	L	L	D	E	D	D	S	F	Y	A	A	N	G	I	S	T	D	D	I	V	A	L	G	L	V	Y	Q	F
Query Conservation
Alig confidence																								.	.	.	.
Template Conservation																								.	.	.	.
Template Sequence		T	Y	Y	F	N	K	N	M	S	T	Y	V	D	Y	I	I	N	Q	I	D	S	D	.	.	.	.	N	K	L	G	V	G	S	D	D	T	V	A	V	G	I	V	Y	Q	F
Template Known Secondary structure							T	T														T	T	.	.	.	.		T	T					B
Template Predicted Secondary structure																								.	.	.	.
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.					.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions