Job Description P77747 Confidence 100.00% Date Thu Jan 5 12:32:27 GMT 2012 Rank 5 Aligned Residues 305 % Identity 18% Template d2fgqx1 SCOP info Transmembrane beta-barrels Porins Porin Resolution 1.45

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.									.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.
Query Sequence		K	L	D	L	Y	G	K	V	D	G	L	H	Y	F	S	D	N	S	A	K	D	.	.	.	.	.	.	.	.	G	D	Q	S	Y	A	R	L	G	F	K	G	E	T	Q	I	N	D	Q	L	T	G	Y	G	Q	W	E	Y	N	I	Q	A	N	N	T	E	S	S	K	N	Q	S	W	T	R	L	A	F	A	G	L
Query Conservation																							.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.																																					.
Template Conservation																																																																			.
Template Sequence		S	V	T	L	F	G	I	V	D	T	N	V	A	Y	V	N	K	D	A	A	G	D	S	R	Y	G	L	G	T	S	G	A	S	T	S	R	L	G	L	R	G	T	E	D	L	G	G	G	L	K	A	G	F	W	L	E	G	E	I	F	G	D	D	G	N	.	A	S	G	F	N	F	K	R	R	S	T	V	S	L
Template Known Secondary structure																	S			T	T	S										S	S	S														T	T													T	T	T	T	S	.	T	T						S
Template Predicted Secondary structure																																																																			.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.									.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.
Query Sequence		K	F	A	D	Y	G	S	F	D	Y	G	R	N	Y	G	V	M	Y	D	I	E	G	W	T	D	M	L	P	E	F	G	G	D	S	Y	T	N	A	D	.	.	.	.	.	.	.	.	N	F	M	T	G	R	A	N	G	V	A	T	Y	R	N	T	D	F	F	G	L	V	N	G	L	N	F	A	V	Q	Y	Q	G
Query Conservation																																									.	.	.	.	.	.	.	.
Alig confidence			.																																						.	.	.	.	.	.	.	.																			.	.	.	.
Template Conservation			.																																																																.	.	.	.
Template Sequence		S	.	G	N	F	G	E	V	R	L	G	R	D	L	V	P	T	S	Q	K	L	T	S	Y	D	L	F	S	A	T	G	I	G	P	F	M	G	F	R	N	W	A	A	G	Q	G	A	D	D	N	G	I	R	A	N	N	L	I	S	Y	Y	T	P	N	F	.	.	.	.	G	G	F	N	A	G	F	G	Y	A	F
Template Known Secondary structure			.		T	T						S	S										G	G	G		T	T	T	T		S	S	S	S				S	S		T	T				S	T	T	T	T	S	S			S	S									B	.	.	.	.	T	T
Template Predicted Secondary structure			.																																																																.	.	.	.
Template SS confidence
		82		.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.					.	.	.	.	150	.	.	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	N	E	G	A	S	N	G	Q	E	G	T	N	N	G	R	D	V	R	H	E	N	G	D	G	W	G	L	S	T	T	Y	D	L	G	M	G	F	S	A	G	A	A	Y	T	S	S	D	R	T	N	D	Q	V	N	H	T	A	A	G	G	D	K	A	D	A	W	T	A	G	L	K	Y	D	A	N	N	I	Y	L
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.																								.																				.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.																								.																				.	.	.	.	.	.
Template Sequence		D	E	K	.	.	.	.	.	.	.	.	.	.	Q	T	I	G	T	A	D	S	V	G	R	Y	I	G	G	Y	V	A	Y	D	N	G	P	.	L	S	A	S	L	G	L	A	Q	Q	K	T	A	V	G	G	L	A	T	.	.	.	.	.	.	D	R	D	E	I	T	L	G	A	S	Y	N	F	G	V	A	K	L
Template Known Secondary structure			T	T	.	.	.	.	.	.	.	.	.	.			B	T	T	B	S	S	T	T												S	S	.															T	T				.	.	.	.	.	.														S	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.																								.																				.	.	.	.	.	.
Template SS confidence
		157	.	.											160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.							.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	M	Y	S	E	T	R	N	M	T	P	F	G	D	S	D	Y	A	V	A	N	K	T	Q	N	F	E	V	T	A	Q	Y	Q	F	D	F	G	L	R	P	A	V	S	F	L	M	S	K	G	R	D	L	H	A	A	G	G	A	D	N	P	A	G	V	D	D	K	D	L	V	K	Y	A	D	I	G	A	T	Y
Query Conservation
Alig confidence																			.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	G	L	L	Q	Q	T	K	F	K	R	D	I	G	G	D	I	.	.	.	.	.	K	T	N	S	Y	M	L	G	A	S	A	P	V	G	G	V	G	E	V	K	L	Q	Y	A	L	Y	D	Q	K	A	I	D	S	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	H	Q	I	T	L	G	Y	V	H
Template Known Secondary structure													T	T	S				.	.	.	.	.														T	T	T													G	G	G	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																			.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.						.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270															.	.	.	.	.	.	.	.	.	280
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.										.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.
Query Sequence		Y	F	N	K	N	M	S	T	Y	V	D	Y	K	I	N	L	L	D	E	D	D	S	F	.	.	.	.	.	.	.	.	.	Y	A	A	N	G	I	S	T	D	D	I	V	A	L	G	L	V	Y	Q	F
Query Conservation																									.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	L	S	K	R	T	A	L	Y	G	N	L	A	F	L	K	N	K	D	A	S	T	L	G	L	Q	A	K	G	V	Y	A	G	G	V	Q	A	G	E	S	Q	T	G	V	Q	V	G	I	R	H	A	F
Template Known Secondary structure			S	S	S	S														T	T							B	T	T	T	B		S				T	T
Template Predicted Secondary structure
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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