Job Description P77747 Confidence 93.56% Date Thu Jan 5 12:32:27 GMT 2012 Rank 33 Aligned Residues 137 % Identity 17% Template d1i78a_ SCOP info Transmembrane beta-barrels OMPT-like Outer membrane protease OMPT Resolution 2.60

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		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.												.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.				300	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Query Sequence		A	W	T	A	G	L	K	Y	D	A	N	N	I	Y	L	A	T	M	Y	S	E	T	R	N	M	T	P	F	G	D	S	D	Y	A	V	A	N	K	T	Q	N	F	.	.	.	.	.	.	.	.	.	.	.	E	V	T	A	Q	Y	Q	F	D	F	G	L	R	P	A	V	S	F	.	.	.	L	M	S	K	G	R
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.									.										.	.	.
Template Conservation																																																															.
Template Sequence		G	L	M	A	G	Y	Q	E	S	R	Y	S	F	T	A	R	G	G	S	Y	I	Y	S	S	E	E	G	F	R	D	D	I	G	S	F	P	N	G	E	R	A	I	G	Y	K	Q	R	F	K	M	P	Y	I	G	L	T	G	S	Y	R	Y	.	E	D	F	E	L	G	G	T	F	K	Y	S	G	W	V	E	S	S
Template Known Secondary structure																							B			T	T		S	S		B			B			T	T		S																						.	T	T
Template Predicted Secondary structure																																																															.
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		306	.	.	.	310	.	.	.				.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	L	H	A	A	G	G	A	.	.	.	D	N	P	A	G	V	D	D	K	D	L	V	K	Y	A	D	I	G	A	T	Y	Y	F	N	K	N	M	S	T	Y	V	D	Y	K	I	N	L	L	D	E	D	D	S	F	Y	A	A	N	G	I	S	T	D	D	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation										.	.	.																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	N	D	E	H	Y	D	P	K	G	R	I	T	Y	R	S	K	V	K	D	Q	N	Y	Y	S	V	A	V	N	A	G	Y	Y	V	T	P	N	A	K	V	Y	V	E	G	A	W	N	R	V	T	N	K	K	G	N	T	S	L	Y	D	H	N	N	N	T	S	D	Y	S	K	N	G	A	G	I	E	N	Y	N	F
Template Known Secondary structure									S	S	S																										T	T																								T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
			369	370	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	V	A	L	G	L	V	Y	Q	F
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		I	T	T	A	G	L	K	Y	T	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		288	.	290	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions