Job Description P77747 Confidence 24.76% Date Thu Jan 5 12:32:27 GMT 2012 Rank 46 Aligned Residues 128 % Identity 15% Template c3fhhA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:outer membrane heme receptor shua; PDBTitle: crystal structure of the heme/hemoglobin outer membrane2 transporter shua from shigella dysenteriae Resolution 2.60 Å

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		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.		.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		K	A	D	A	W	T	A	G	L	K	Y	D	A	N	N	I	Y	L	A	T	M	Y	S	E	T	R	N	M	T	P	F	G	D	S	D	Y	A	V	A	N	K	T	Q	N	F	E	V	T	A	Q	Y	Q	F	D	F	.	G	L	R	P	A	V	S	F	L	M	S	K	G	R	D	L	H	A	A	G	G	A	D	N
Query Conservation																																																									.
Alig confidence																																											.														.																								.
Template Conservation																																											.																																						.
Template Sequence		K	I	W	G	W	D	V	M	T	K	Y	T	T	D	L	F	S	L	D	V	A	Y	N	R	T	R	G	K	D	T	D	T	G	E	Y	I	S	S	I	N	P	.	D	T	V	T	S	T	L	N	I	P	I	A	H	S	G	F	S	V	G	W	V	G	T	F	A	D	R	S	T	H	I	S	S	K	Q	P	G	.
Template Known Secondary structure															S	S															T	T	T			B		S	S				.												T	T	S	S																							.
Template Predicted Secondary structure																																											.																																						.
Template SS confidence
		506	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.		.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.				.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.
Query SS confidence																								.	.	.
Query Sequence		P	A	G	V	D	D	K	D	L	V	K	Y	A	D	I	G	A	T	Y	Y	F	N	.	.	.	K	N	M	S	T	Y	V	D	Y	K	I	N	L	L	D	E	D	D	S	F	Y	A	A	N	G	I	S	T	D	D	I	V	A	L	G	L	V	Y	Q	F
Query Conservation																								.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.														.	.	.											.	.
Template Conservation		.	.	.	.	.	.	.	.	.																											.	.
Template Sequence		.	.	.	.	.	.	.	.	.	Y	G	V	N	D	F	Y	V	S	Y	Q	G	Q	Q	A	L	K	G	M	T	T	T	L	V	L	G	.	.	N	A	F	D	K	E	Y	W	S	P	Q	G	I	P	Q	D	G	R	N	G	K	I	F	V	S	Y	Q	W
Template Known Secondary structure		.	.	.	.	.	.	.	.	.														G	G	G	T	T									.	.	S	T	T					B		T	T	S		B				S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																											.	.
Template SS confidence
											587	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.			.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions