Job Description P02919 Confidence 100.00% Date Thu Jan 5 10:57:35 GMT 2012 Rank 8 Aligned Residues 346 % Identity 27% Template d2c5wb1 SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 2.55

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		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430				.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
Predicted Secondary structure																								.	.	.
Query SS confidence																								.	.	.
Query Sequence		S	P	Q	P	A	F	M	Q	L	V	R	Q	E	L	Q	A	K	L	G	D	K	V	.	.	.	K	D	L	S	G	V	K	I	F	T	T	F	D	S	V	A	Q	D	A	A	E	K	A	A	V	E	G	I	P	A	L	K	K	Q	R	K	L	S	D	L	E	T	A	I	V	V	V	D	R	F	S	G	E	V	R
Query Conservation																								.	.	.
Alig confidence																								.	.	.																																				.	.	.
Template Conservation																																																														.	.	.
Template Sequence		S	N	Y	P	A	Y	M	D	N	Y	L	K	E	V	I	N	Q	V	E	E	E	T	G	Y	N	L	L	T	T	G	M	D	V	Y	T	N	V	D	Q	E	A	Q	K	H	L	W	D	I	Y	N	T	D	E	Y	V	A	Y	P	D	D	.	.	.	E	L	Q	V	A	S	T	I	V	D	V	S	N	G	K	V	I
Template Known Secondary structure				S		G	G	G																S			T	T	T	S																							S	S	S				S		S	.	.	.	S										T	T	T		B
Template Predicted Secondary structure																																																														.	.	.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.				.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
		486	.	.	.	490	.	.	.	.	.	.	.				.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.		.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.
Predicted Secondary structure														.	.	.																				.
Query SS confidence														.	.	.																				.
Query Sequence		A	M	V	G	G	S	E	P	Q	F	A	G	.	.	.	Y	N	R	A	M	Q	A	R	R	S	I	G	S	L	A	K	P	A	T	.	Y	L	T	A	L	S	Q	P	K	I	Y	R	L	N	T	W	I	A	D	A	P	I	A	L	R	Q	P	N	G	Q	V	W	S	P	Q	N	D	D	R	R	Y	S	E	S	G
Query Conservation														.	.	.																				.
Alig confidence														.	.	.																				.																													.	.	.											.	.
Template Conservation																																																																	.	.	.											.	.
Template Sequence		A	Q	L	G	A	R	H	Q	S	S	N	V	S	F	G	I	N	Q	A	V	E	T	N	R	D	W	G	S	T	M	K	P	I	T	D	Y	A	P	A	L	E	Y	G	V	Y	E	S	T	A	T	I	V	H	D	E	P	Y	N	Y	P	G	T	N	.	.	.	T	P	V	Y	N	W	D	R	G	Y	.	.	F	G
Template Known Secondary structure							S	S						T	T				T	T	T				S			G	G	G						T							T	T	S		S	B	S	S						S	S		B		T	T	S	S	.	.	.		B				T	T	S			.	.
Template Predicted Secondary structure																																																																	.	.	.											.	.
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.				.	.	.	.	410	.	.	.	.	.			.	.
		562	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.							.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.
Query Sequence		R	V	M	L	V	D	A	L	T	R	S	M	N	V	P	T	V	N	L	G	M	A	L	G	L	P	A	V	T	E	T	W	I	K	L	G	V	P	K	D	Q	L	H	P	V	P	.	.	.	.	.	.	A	M	L	L	G	A	L	N	L	T	P	I	E	V	A	Q	A	F	Q	T	I	A	S	G	G	N	R	A
Query Conservation																																																.	.	.	.	.	.
Alig confidence																																																.	.	.	.	.	.
Template Conservation
Template Sequence		N	I	T	L	Q	Y	A	L	Q	Q	S	R	N	V	P	A	V	E	T	L	N	K	V	G	L	N	R	A	K	T	F	L	N	G	L	G	I	D	Y	P	S	I	H	Y	S	N	A	I	S	S	N	T	T	E	S	D	K	K	Y	G	A	S	S	E	K	M	A	A	A	Y	A	A	F	A	N	G	G	T	Y	Y
Template Known Secondary structure											T	T																							T	T	T		B		S	S			G	G	G	G	S					S	S			S	S	B	S															T	T	S
Template Predicted Secondary structure
Template SS confidence
		418	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.
		636	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	L	S	A	L	R	S	V	I	A	E	D	G	K	V	L	Y	Q	S	F	P	Q	A	E	R	A	V	P	A	Q	A	A	Y	L	T	L	W	T	M	Q	Q	V	V	Q	R	G	T	G	R	Q	L	G	A	K	Y	P	N	L	H	L	A	G	K	T	G	T	T	N	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.																																.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.																																.	.
Template Sequence		K	P	M	Y	I	H	K	V	V	F	S	D	G	S	E	K	E	.	F	S	N	V	G	T	R	A	M	K	E	T	T	A	Y	M	M	T	D	M	M	K	T	V	L	T	Y	G	T	G	R	.	.	N	A	Y	L	A	W	L	P	Q	A	G	K	T	G	T	S	N	Y	T	D	E	E	I	E	N	H	I	K	T
Template Known Secondary structure				B	S							T	T	S					.									S																			S	T	T	G	.	.	G	G			T	T																				T
Template Predicted Secondary structure																			.																																.	.
Template SS confidence
		498	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.		.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.			.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.
					704	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.		.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750			.	.	.	.	.	.	.	.	.	760	.	.	.	.	.
Predicted Secondary structure		.	.	.																													.																				.	.
Query SS confidence		.	.	.																													.																				.	.
Query Sequence		.	.	.	N	N	V	D	T	W	F	A	G	I	D	G	S	T	V	T	I	T	W	V	G	R	D	N	N	Q	P	T	.	K	L	Y	G	A	S	G	A	M	S	I	Y	Q	R	Y	L	A	N	Q	.	.	T	P	T	P	L	N	L	V	P	P	E	D	I	A	D
Query Conservation		.	.	.																													.																				.	.
Alig confidence		.	.	.																													.																				.	.
Template Conservation
Template Sequence		S	Q	F	V	A	P	D	E	L	F	A	G	Y	T	R	K	Y	S	M	A	V	W	T	G	Y	S	N	R	L	T	P	L	V	G	N	G	L	T	V	A	A	K	V	Y	R	S	M	M	T	Y	L	S	E	G	S	N	P	E	D	W	N	I	P	E	G	L	Y	R
Template Known Secondary structure		S	S				S									S	S										S	S	T	T	S				G	G	G	G	G															S	S	S									T	T
Template Predicted Secondary structure
Template SS confidence
		575	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions