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Job DescriptionP02919
Confidence98.70%DateThu Jan 5 10:57:35 GMT 2012
Rank70Aligned Residues236
% Identity29%Templated1w79a1
SCOP infobeta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like Dac-like
Resolution1.8

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   452.......460.........470.........480.........490.........500.........510.........520... ......530
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Query Sequence  KAAVEGIPALKKQRKLSDLETAIVVVDRFSGEVRAMVGGSEPQFAGYNRAMQARRSIGSLAKPATYLTALSQ. PKIYRLN
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Template Sequence  TELREDIDAILEDPALEGAVSGVVVVDTATGEELYSRDG. . . . . . . . . . . . GEQLLPASNMKLFTAAAALEVLGADHSFG
Template Known Secondary structure  TT
GGGTT
TTT

ST............T

B

GGGT
TT
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   3......10.........20.........30.........40. ........50.........60.........70
 
   531...... ..540..... ....550.........560
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Query Sequence  TWIADAP. . . . . . . . . . IALRQPNG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . QVWSPQNDDRRYSES
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Template Sequence  TEVAAESAPGRRGEVQDLYLVGRGDPTLSAEDLDAMAAEVAASGVRTVRGDLYADDTWFDSERLVDDWWPEDEPYAYSAQ
Template Known Secondary structure  SS


TTSS

S
TT

TT


S

TTS
S

S
TTS
GGGTTBGGG

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   71........80.........90.........100.........110.........120.........130.........140.........150
 
  
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  ISALTVAHGERFDTGVTEVSVTPAAEGEPADVDLGAAEGYAELDNRAVTGAAGSANTLVIDRPVGTNTIAVTGSLPADAA
Template Known Secondary structure 

SS

TTTTS

STTSB

GGGTTTS


TT






TT

STTS
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   151........160.........170.........180.........190.........200.........210.........220.........230
 
   561... .....570.........580....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GRVM. . . . . . . . . . . . . . . . . . . . . . . . . LVDALTRSMNVPTVNLGMAL
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Template Sequence  PVTALRTVDEPAALAGHLFEEALESNGVTVKGDVGLGGVPADWQDAEVLADHTSAELSEILVPFMKFSNNGHAEMLVKSI
Template Known Secondary structure 

S
TT

S




S

TT
T
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   231........240.........250.........260.........270.........280.........290.........300.........310
 
   585 ....590.........600.........610..... ....620.........630.........640.........650.
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Query Sequence  G. . . . . . . . . . . . LPAVTETWIKLGVPKDQLHPVPAMLLGALN. LTPIEVAQAFQTIASGGNRAPLSALRSVIAEDGKVL
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Template Sequence  GQETAGAGTWDAGLVGVEEALSGLGVDTAGLVLNDGSGLSRGNLVTADTVVDLLGQAGS. . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  S

STT


TT
B
S
SSS
STT
BB
T.....................
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   311........320.........330.........340.........350.........360.........
 
   652.......660.........670.........680.........690. ........700.........710... ......720......
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Query Sequence  YQSFPQAERAVPAQAAYLTLWTMQQVVQRGTGRQLGAKYP. NLHLAGKTGTTNNNVDTWFAGI. . . . DGSTVTITWVGRD
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Template Sequence  . . . . . . . APWAQTWSASLPVAGESDPFVGGTLANRMRGTAAEGVVEAKTGTMSGVSA. . LSGYVPGPEGELAFSIVNNGH
Template Known Secondary structure  .......STTS
BTT
SSGGGTTSSTTSTTTTT


TT..

TT



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   370.........380.........390.........400.........410......... 420.........430.........440
 
   727..
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Query Sequence  NNQ
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Template Conservation     
Template Sequence  SGP
Template Known Secondary structure  SSS
Template Predicted Secondary structure 

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   441..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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