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Job DescriptionP02919
Confidence100.00%DateThu Jan 5 10:57:35 GMT 2012
Rank23Aligned Residues285
% Identity18%Templated1vqqa3
SCOP infobeta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   442.......450.........460.........470.........480.........490.... .....500.
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Query Sequence  FDSVAQDAAEKAAVEGIPALKKQRKLSDLETAIVVVDRFSGEVRAMVGGSEPQ. . . . . . . . . . . . . . . . . . . . FAGYNRA
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Template Sequence  IDAKVQKSIYNNMKNDY. . . . . . . . . . . . . GSGTAIHPQTGELLALVSTPSYDVYPFMYGMSNEEYNKLTEDKKEPLLNK
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TTSS.............TTTTS


S


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   328.330.........340.... .....350.........360.........370.........380.........390....
 
   502.......510.........520.........530.........540.........550.........560.........570.........580.
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Query Sequence  MQARRSIGSLAKPATYLTALSQPKIYRLNTWIADAPIALRQPNGQVWSPQNDDRRYSESGRVMLVDALTRSMNVPTVNLG
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Template Sequence  FQITTSPGSTQKILTAMIGLNNKTLDDKTSYKIDGKGWQKDKSWGGYNVTRYEVVN. . . GNIDLKQAIESSDNIFFARVA
Template Known Secondary structure  TTS
B

GGGTTSS
TT

SS
SSGGGTT


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   395....400.........410.........420.........430.........440.........450 .........460.........470.
 
   582.......590.........600....... ..610.........620.........630.........640.
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Query Sequence  MALGLPAVTETWIKLGVPKDQLHPVP. . . . . . . . . . . . . . . . . . . . AMLLGALNLTPIEVAQAFQTIASGGNRAPLSALR
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Template Sequence  LELGSKKFEKGMKKLGVGEDIPSDYPFYNAQISNKNLDNEILLADSGYGQGEILINPVQILSIYSALENNGNINAPHLLK
Template Known Secondary structure 
TTTTS



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   472.......480.........490.........500.........510.........520.........530.........540.........550.
 
   642.......650.........660.........670.........680.........690.........700. ........710... ...
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Query Sequence  SVIAEDGKVLYQSFPQAERAVPAQAAYLTLWTMQQVVQRGTGRQLGAKYPNLHLAGKTGT. . TNNNVDTWFAGI. . . DGS
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Template Sequence  DTKNKVWK. . . . . . . . . KNIISKENINLLTDGMQQVVNKTHKED. . IYRSYANLIGKSGTAELKGRQIGWFISYDKDNPN
Template Known Secondary structure  TS


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   552....... 560.........570.........580...... ...590.........600.........610.........620
 
   717..720.........730.........740.........750...
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Query Sequence  TVTITWVGRDNNQPTKLYGASGAMSIYQRYLANQTPT
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Template Sequence  MMMAINVKDVQDKGMASYNAKISGKVYDELYENGNKK
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TTTTTTGGGTS
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   627..630.........640.........650.........660...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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