Job Description P02919 Confidence 21.55% Date Thu Jan 5 10:57:35 GMT 2012 Rank 113 Aligned Residues 83 % Identity 17% Template d1smyf3 SCOP info Sigma2 domain of RNA polymerase sigma factors Sigma2 domain of RNA polymerase sigma factors Sigma2 domain of RNA polymerase sigma factors Resolution 2.70

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		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	A	N	E	A	Y	M	A	L	I	M	D	A	R	Y	S	K	D	R	I	L	E	L	Y	M	N	E	V	Y	L	G	Q	S	G	D	N	E	I	R	G	F	P	L	A	S	L	Y	Y	F	G	R	P	V	E	E	L	S	L	D	Q	Q	A	L	L	V	G	M	V	K	G	A	S	I	Y	N	P	W	R	N
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Sequence		P	K	E	H	K	R	Y	L	H	I	A	R	E	G	E	A	A	R	Q	H	L	I	E	A	N	L	R	L	V	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	K	K	Y	T	G	R	G	L	S	F	L	D	L	I	Q	E	G	N	Q	.	G	L	I	R	A	V	E	K	F	E	Y	K	R	R
Template Known Secondary structure																										T							.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	S	G	G	G	T	S												.											T	T	S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.														.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.	.
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	K	L	A	L	E	R	R	N	L	V	L	R	L	L	Q	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	K	F	S	T	Y	A	T	W	W	I	R	Q	A	I	N	R
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions