Job Description P02919 Confidence 100.00% Date Thu Jan 5 10:57:35 GMT 2012 Rank 18 Aligned Residues 309 % Identity 17% Template d1rp5a4 SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 3.00

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		441	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.											.	.	.	500	.	.	.	.	.	.	.	.	.	510
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.	.
Query Sequence		T	F	D	S	V	A	Q	D	A	A	E	K	A	A	V	E	G	I	P	A	L	K	K	Q	R	K	L	S	D	L	E	T	A	I	V	V	V	D	R	F	S	G	E	V	R	A	M	V	G	G	S	E	P	Q	F	A	.	.	.	.	.	.	.	.	.	.	G	Y	N	R	A	M	Q	A	R	R	S	I	G	S
Query Conservation																																																										.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.
Template Sequence		T	I	S	S	P	L	Q	S	F	M	E	T	Q	M	D	A	F	Q	E	K	V	K	G	K	Y	.	.	.	.	.	.	M	T	A	T	L	V	S	A	K	T	G	E	I	L	A	T	T	Q	R	P	T	F	D	A	D	T	K	E	G	I	T	E	D	F	V	W	R	D	I	L	Y	Q	S	N	Y	E	P	G	S
Template Known Secondary structure																									S		.	.	.	.	.	.								T	T	T		B								S			B	T	T	T	T	B	T			S	S						T	T	T	S			B			G	G
Template Predicted Secondary structure																											.	.	.	.	.	.
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.							.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		511	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	K	P	A	T	Y	L	T	A	L	S	Q	P	K	I	Y	R	L	N	T	W	I	A	D	A	P	I	A	L	R	Q	P	N	G	Q	V	W	S	P	Q	N	D	D	R	R	Y	S	E	S	G	R	V	M	L	V	D	A	L	T	R	S	M	N	V	P	T	V	N	L	G	M	A	L	G	L	P	A	V	T
Query Conservation
Alig confidence																		.																						.									.	.
Template Conservation																		.																						.									.	.
Template Sequence		T	M	K	V	M	M	L	A	A	A	I	D	N	N	T	F	.	P	G	G	E	V	F	N	S	S	E	L	K	I	A	D	A	T	I	R	D	W	.	D	V	N	E	G	L	T	G	.	.	G	R	M	M	T	F	S	Q	G	F	A	H	S	S	N	V	G	M	T	L	L	E	Q	K	M	G	D	A	T	W	L
Template Known Secondary structure		G	G												T			.		T	T						S					T	T							.				T	T	S		S	.	.													T
Template Predicted Secondary structure																		.																						.									.	.
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.		.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.		.	.	.	.	.	380	.	.			.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
		591	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.																			.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	T	W	I	K	L	G	V	P	K	D	Q	L	H	P	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	M	L	L	G	A	L	N	L	T	P	I	E	V	A	Q	A	F	Q	T	I	A	S	G	G	N	R	A	P	L	S	A	L	R	S	V	I	A	E	D	G	K	V	L	Y
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Template Conservation																																										.
Template Sequence		D	Y	L	N	R	F	K	F	G	V	P	T	R	F	G	L	T	D	E	Y	A	G	Q	L	P	A	D	N	I	V	N	I	A	M	S	A	F	G	Q	G	.	I	S	V	T	Q	T	Q	M	L	R	A	F	T	A	I	A	N	D	G	V	M	L	E	P	K	F	I	S	A	L	Y	D	P	N	D	Q	S	V	R
Template Known Secondary structure							T	T	T	T	S					S		S	S					B				S	S								T	T	T		S	.		B	B														T	T	T						B								T	T	T	T
Template Predicted Secondary structure																																										.
Template SS confidence
		414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.		.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.
		653	.	.	.	.	.		.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.									.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.														.	.	.	.	.	.	.	710
Predicted Secondary structure								.																													.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.																													.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	S	F	P	Q	A	.	E	R	A	V	P	A	Q	A	A	Y	L	T	L	W	T	M	Q	Q	V	V	Q	R	G	T	G	R	Q	L	.	.	.	.	.	.	.	.	G	A	K	Y	P	N	L	H	L	A	G	K	T	G	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	N	N	N	V	D	T	W	F
Query Conservation								.																													.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.																													.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	S	Q	K	E	I	V	G	N	P	V	S	K	E	A	A	S	V	T	R	D	H	M	V	M	V	G	T	D	P	T	Y	G	T	M	Y	N	H	S	T	G	K	A	T	V	N	V	P	G	Q	N	V	A	L	K	S	G	T	A	E	I	A	D	E	K	N	G	G	Y	L	T	G	S	T	N	N	I	F	S	V
Template Known Secondary structure												S																			T	T	T		T	T	B		T	T	T	S	S	B	S	S		B	T	T	B												B		T	T	T	S	S	B			S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		493	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.
		711	.	.	.	.					.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.
Predicted Secondary structure							.	.	.	.
Query SS confidence							.	.	.	.
Query Sequence		A	G	I	D	G	.	.	.	.	S	T	V	T	I	T	W	V	G	R	D	N	N	Q	P	T	K	L	Y	G	A	S	G	A	M	S	I	Y	Q	R	Y	L	A	N	Q	T	P	T	P	L	N	L	V	P	P	E
Query Conservation							.	.	.	.
Alig confidence							.	.	.	.																.
Template Conservation																										.
Template Sequence		V	S	M	H	P	A	E	N	P	D	F	I	L	Y	V	T	V	Q	Q	P	E	H	Y	S	.	G	I	Q	L	G	E	F	A	N	P	I	L	E	R	A	S	A	M	K	E	S	L	N	L	Q	T	T	A	K	A
Template Known Secondary structure						S	T	T	S		S									S		S	S			.																			T	T	T	T	T	T	T	S			G	G
Template Predicted Secondary structure																										.
Template SS confidence
		573	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.		.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions