Job Description P02919 Confidence 96.54% Date Thu Jan 5 10:57:35 GMT 2012 Rank 94 Aligned Residues 275 % Identity 12% Template d1rgya_ SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 1.52

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		445	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		V	A	Q	D	A	A	E	K	A	A	V	E	G	I	P	A	L	K	K	Q	R	K	L	S	D	L	E	T	A	I	V	V	V	D	R	F	S	G	E	V	R	A	M	V	G	G	S	E	P	Q	F	A	G	Y	N	R	A	M	Q	A	R	R	S	I	G	S	L	A	K	P	A	T	Y	L	T	A	L	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																							.	.	.	.	.	.								.	.																																										.	.	.
Template Conservation																							.	.	.	.	.	.								.	.
Template Sequence		Q	I	A	D	I	V	N	R	T	I	T	P	L	M	Q	E	Q	A	I	P	G	.	.	.	.	.	.	M	A	V	A	I	I	Y	.	.	E	G	K	P	Y	Y	F	T	W	G	K	A	D	I	A	N	N	H	P	V	T	Q	Q	T	L	F	E	L	G	S	V	S	K	T	F	N	G	V	L	G	G	D	A	I
Template Known Secondary structure																			T		S		.	.	.	.	.	.								.	.	T	T												T	T	T	T					T	T		B				G	G	G
Template Predicted Secondary structure																							.	.	.	.	.	.								.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.							.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		522	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	Q	P	K	I	Y	R	L	N	T	W	I	A	D	A	P	I	A	L	R	Q	P	N	G	Q	V	W	S	P	Q	N	D	D	R	R	Y	S	E	S	G	R	V	M	L	V	D	A	L	T	R	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.									.	.	.	.	.	.	.	.	.	.	.	.											.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.									.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Template Sequence		A	R	G	E	I	.	K	L	S	D	P	V	T	K	.	.	.	.	.	.	.	.	.	.	.	.	Y	W	P	E	L	T	G	K	Q	W	.	.	.	R	G	I	S	L	L	H	L	A	T	Y	T	A	G	G	L	P	L	Q	I	P	D	D	I	T	D	K	A	A	L	L	R	F	Y	Q	N	W	Q	P	Q	W
Template Known Secondary structure			T	T	S		.		T	T	S	B				.	.	.	.	.	.	.	.	.	.	.	.			T	T				G	G	G	.	.	.	T	T		B						T	T		S	S				S	S			T	T			S														S	S
Template Predicted Secondary structure							.									.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Template SS confidence
		79	80	.	.	.		.	.	.	.	.	.	90	.													.	.	.	.	.	.	.	.	100	.				.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
										573	.	.	.	.	.	.	580	.				.	.	.	.	.	.	.	.	590	.	.	.	.	.						.	.	.	.	600	.	.	.	.	.	.	.																								.	.	610	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.										.	.	.															.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.										.	.	.															.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	M	N	V	P	T	V	N	L	G	.	.	.	M	A	L	G	L	P	A	V	T	E	T	W	I	K	.	.	.	.	.	L	G	V	P	K	D	Q	L	H	P	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	M	L	L	G	A
Query Conservation		.	.	.	.	.	.	.	.										.	.	.															.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.										.	.	.															.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	P	G	A	K	R	L	Y	A	N	S	S	I	G	L	F	G	A	L	A	V	K	P	S	G	M	S	Y	E	E	A	M	T	R	R	V	L	Q	P	L	K	L	A	H	T	W	I	T	V	P	Q	S	E	Q	K	N	Y	A	W	G	Y	R	E	G	K	P	V	H	V	S	P	G	Q	L	D	A	E	A	Y	G
Template Known Secondary structure			T	T	S																	T	T	T	T	T	S										T	T	T	T	T	T		T	T			S	S			G	G	G	G	G	G	B						T	T									T	T					T
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		614	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.							.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.
Query Sequence		L	N	L	T	P	I	E	V	A	Q	A	F	Q	T	I	A	S	G	G	N	R	A	P	L	S	A	L	R	S	V	.	.	.	.	.	.	I	A	E	D	G	K	V	L	Y	Q	S	F	P	Q	A	E	R	A	V	P	A	Q	A	A	Y	L	T	L	W	T	M	Q	Q	V	V	Q	R	G	T	G	R	Q	L	G
Query Conservation																																.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.
Template Conservation
Template Sequence		V	K	S	S	V	I	D	M	A	R	W	V	Q	A	N	M	D	A	S	H	V	Q	E	K	T	L	Q	Q	G	I	E	L	A	Q	S	R	Y	W	R	I	G	D	M	Y	Q	G	L	G	W	E	M	L	N	W	P	L	K	A	D	S	I	I	N	G	S	D	S	K	V	A	L	A	A	L	P	A	V	E	V	N
Template Known Secondary structure																			G	G	G			S											T	S						T	T					S	S						S	S										T	S					T	S
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		688	.	690	.			.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		A	K	Y	P	.	.	N	L	H	L	A	G	K	T	G	T	T	N	N	N	V	D	T	W	F	A	G	I	D	G	S	T	V	T	I	T	W	V	G	R	D	N	N	Q	P	T	K	L	Y	G	A	S	G	A	M	S	I	Y	Q	R	Y	L	A	N	Q
Query Conservation						.	.
Alig confidence						.	.																																	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.
Template Sequence		P	P	V	P	A	V	K	A	S	W	V	H	K	T	G	S	T	G	G	F	G	S	Y	V	A	F	V	P	E	K	N	L	G	I	V	M	L	A	.	.	.	.	.	.	.	N	K	S	Y	P	N	P	V	R	V	E	A	A	W	R	I	L	E	K	L
Template Known Secondary structure								S	S										S	S									G	G	G	T								.	.	.	.	.	.	.	S	B																	T	T
Template Predicted Secondary structure																																								.	.	.	.	.	.	.
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340								.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions