Job Description P02919 Confidence 99.76% Date Thu Jan 5 10:57:35 GMT 2012 Rank 50 Aligned Residues 247 % Identity 17% Template d1bsga_ SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 1.85

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		449	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	E	K	A	A	V	E	G	I	P	A	L	K	K	Q	R	K	L	S	D	L	E	T	A	I	V	V	V	D	R	F	S	G	E	V	R	A	M	V	G	G	S	E	P	Q	F	A	G	Y	N	R	A	M	Q	A	R	R	S	I	G	S	L	A	K	P	A	T	Y	L	T	A	L	S	Q	P	K	I	Y	R
Query Conservation
Alig confidence																			.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Template Conservation																			.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Template Sequence		D	A	E	R	R	L	A	G	L	E	R	A	S	G	A	R	L	.	.	.	.	.	.	.	G	V	Y	A	Y	D	T	G	S	G	R	T	V	A	Y	R	A	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	L	F	P	M	C	S	V	F	K	T	L	S	S	A	A	V	L	R	D	L	.	.	.	D
Template Known Secondary structure															T	S			.	.	.	.	.	.	.							T	T	T							S	T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.					G	G	G	G												T	.	.	.
Template Predicted Secondary structure																			.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.								.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.														.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.				.
		529	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.		.	.	.	.	.	.	.	.	570					.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.		.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.
Predicted Secondary structure																																			.										.	.	.	.																	.
Query SS confidence																																			.										.	.	.	.																	.
Query Sequence		L	N	T	W	I	A	D	A	P	I	A	L	R	Q	P	N	G	Q	V	W	S	P	Q	N	D	D	R	R	Y	S	E	S	G	.	R	V	M	L	V	D	A	L	T	.	.	.	.	R	S	M	N	V	P	T	V	N	L	G	M	A	L	G	L	.	P	A	V	T	E	T	W	I	K	L	G	V	P	K	D	Q
Query Conservation																																			.										.	.	.	.																	.
Alig confidence																																			.										.	.	.	.																	.
Template Conservation
Template Sequence		R	N	G	E	F	L	S	R	R	I	L	Y	T	Q	D	D	V	E	Q	A	D	G	A	P	E	T	G	K	P	Q	N	L	A	N	G	M	T	V	E	E	L	C	E	V	S	I	T	A	S	D	N	C	A	A	N	L	M	L	R	E	L	G	G	P	A	A	V	T	R	F	V	R	S	L	G	D	R	V	T	R
Template Known Secondary structure		S	S	S	T	T	T	T														T			T	T	T	T	S																				S														T	S	T										T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		603	.	.							.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.
Query Sequence		L	H	P	.	.	.	.	.	.	V	P	A	M	L	L	G	A	L	N	L	T	P	I	E	V	A	Q	A	F	Q	T	I	A	S	G	G	N	R	A	P	L	S	A	L	R	S	V	I	A	E	D	G	K	V	L	Y	Q	S	F	P	Q	A	E	R	A	V	P	A	Q	A	A	Y	L	T	L	W	T	M	Q	Q
Query Conservation					.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	D	R	W	E	P	E	L	N	S	A	E	P	G	R	V	T	D	T	T	S	P	R	A	I	T	R	T	Y	G	R	L	V	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	L	N	P	R	D	R	R	L	L	T	S	W	L	L	A
Template Known Secondary structure				S		T	T	G	G	G				T	T			T	T																T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S														T
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.																													.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		677	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.						.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750
Predicted Secondary structure																																							.	.	.	.	.
Query SS confidence																																							.	.	.	.	.
Query Sequence		V	V	Q	R	G	T	G	R	Q	L	G	A	K	Y	P	N	L	H	L	A	G	K	T	G	T	T	N	N	N	V	D	T	W	F	A	G	I	.	.	.	.	.	D	G	S	T	V	T	I	T	W	V	G	R	D	N	N	Q	P	T	K	L	Y	G	A	S	G	A	M	S	I	Y	Q	R	Y	L	A	N	Q
Query Conservation																																							.	.	.	.	.
Alig confidence												.																				.							.	.	.	.	.																			.	.
Template Conservation												.																				.																														.	.
Template Sequence		N	T	T	S	G	D	R	F	R	A	.	G	L	P	D	D	W	T	L	G	D	K	T	G	A	G	R	Y	G	T	.	N	N	D	A	G	V	T	W	P	P	G	R	A	P	I	V	L	T	V	L	T	A	K	T	E	Q	D	A	A	.	.	R	D	D	G	L	V	A	D	A	A	R	V	L	A	E	T	L
Template Known Secondary structure				S		T	T	T				.		S		T	T	S										S	T	T		.										T	T	S												S	S	T	T			.	.
Template Predicted Secondary structure												.																				.																														.	.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.			.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions