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Job DescriptionP02919
Confidence99.73%DateThu Jan 5 10:57:35 GMT 2012
Rank52Aligned Residues219
% Identity16%Templated1alqa_
SCOP infobeta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   443......450...... ...460.........470.........480.........490.........500.........510......
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Query Sequence  DSVAQDAAEKAAVE. . . . . . GIPALKKQRKLSDLETAIVVVDRFSGEVRAMVGGSEPQFAGYNRAMQARRSIGSLAKPAT
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Template Sequence  DKLISETAKSVMKEFAAAAKELNDLEKKYNAH. . . IGVYALDTKSGKEVKFNS. . . . . . . . . . . . . DKRFAYASTSKAIN
Template Known Secondary structure  TTT





T
...TTT

ST.............TS

GGG
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   276...280.........290.........300....... ..310.........320..... ....330.........
 
   517..520.........530.........540.........550.........560....... ..570.........580.... .....590.
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Query Sequence  YLTALSQPKIYRLNTWIADAPIALRQPNGQVWSPQNDDRRYSESGRVMLVD. . . . ALTRSMNVPTVNLGMAL. GLPAVTE
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Template Sequence  SAILLEQVPYNKL. . . . . NKKVHINKDDIVAYSPILEKYVG. . . KDITLKALIEASMTYSDNTANNKIIKEIGGIKKVKQ
Template Known Secondary structure  SS
GGGT.....T

GGG

SS
TTGGGGTT...

T
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   77..80......... 90.........100.........110.. .......120.........130.........140........
 
   592.......600.... .....610.........620.........630.........640.........650.........660.....
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Query Sequence  TWIKLGVPKDQLH. . . . . . PVPAMLLGALNLTPIEVAQAFQTIASGGNRAPLSALRSVIAEDGKVLYQSFPQAERAVPAQ
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Template Sequence  RLKELGDKVTNPVRYEIELNYYSPKSKKDTSTPAAFGKTLNKLIAN. . . . . . . . . . . . . . . . . . . . . . . . . . . . GKLSKE
Template Known Secondary structure  TT

S





TTGGG


TT

TT
TTS............................SS

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   151........160.........170.........180.........190...... ...200..
 
   666...670.........680.........690. ........700.........710.........720..
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Query Sequence  AAYLTLWTMQQVVQRGTGRQLGAKYP. NLHLAGKTGTTNNNVDTWFAGIDGSTVTITW
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Template Sequence  NKKFLLDLMLNNKSGDTL. . IKDGVPKDYKVADKSGQAITY. . . . . . ASRND. VAFVY
Template Known Secondary structure  T
GGGTTT..S
TT

SST......T
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   203......210.........220 .........230.........240. ..... ...250.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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