Job Description P02919 Confidence 95.48% Date Thu Jan 5 10:57:35 GMT 2012 Rank 101 Aligned Residues 231 % Identity 16% Template c3o3vB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:beta-lactamase; PDBTitle: crystal structure of clbp peptidase domain Resolution 2.40 Å

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		445	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		V	A	Q	D	A	A	E	K	A	A	V	E	G	I	P	A	L	K	K	Q	R	K	L	S	D	L	E	T	A	I	V	V	V	D	R	F	S	G	E	V	R	A	M	V	G	G	S	E	P	Q	F	A	G	Y	N	R	A	M	Q	A	R	R	S	I	G	S	L	A	K	P	A	T	Y	L	T	A	L	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.										.																																												.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.										.
Template Sequence		R	L	S	T	L	I	H	Q	R	M	Q	E	A	.	.	.	.	.	.	.	.	.	.	.	K	V	P	A	L	S	V	S	V	.	T	I	K	G	V	R	Q	R	F	V	Y	G	V	A	D	V	A	S	Q	K	A	N	T	L	D	T	V	Y	E	L	G	S	M	S	K	A	F	T	G	L	V	V	Q	I	L	I
Template Known Secondary structure															.	.	.	.	.	.	.	.	.	.	.	T		S							.			T	T												T	T	T	T					T	T		B				G	G	G	G
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.										.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.												.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		522	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.				.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.
Query SS confidence																																																										.	.	.
Query Sequence		S	Q	P	K	I	Y	R	L	N	T	W	I	A	D	A	P	I	A	L	R	Q	P	N	G	Q	V	W	S	P	Q	N	D	D	R	R	Y	S	E	S	G	R	V	M	L	V	D	A	L	T	R	S	M	N	V	P	T	.	.	.	V	N	L	G	M	A	L	G	L	P	A	V	T	E	T	W	I	K	L	G	V
Query Conservation																																																										.	.	.
Alig confidence							.									.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.
Template Conservation							.									.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	E	G	R	L	.	R	Q	G	D	D	I	I	T	.	.	.	.	.	.	.	.	.	.	.	.	Y	L	P	E	M	R	L	N	Y	Q	G	K	P	A	S	L	T	V	A	D	F	L	Y	H	T	S	G	L	P	F	S	T	L	A	R	L	E	N	P	M	P	G	S	A	V	A	Q	Q	L	R	N	E	N	L
Template Known Secondary structure			T	T	S		.		T	T	S	B				.	.	.	.	.	.	.	.	.	.	.	.			T	T						T	T						B						T	T		S				T								S			S	S							S	T	T
Template Predicted Secondary structure							.									.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		110	.	.	.	.		.	.	.	.	.	120	.	.													.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		599	600	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	K	D	Q	L	H	P	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	F	A	P	G	A	K	F	S	Y	A	S	A	N	Y	D	V	L	G	A	V	I	E	N	V	T	G	K	T	F	T	E	V	I	A	E	R	L	T	Q	P	L	G	M	S	A	T	V	A	V	K	G	D	E	I	I	V	N	K	A	S	G	Y	K	L	G	F	G	K	P	V	L	F	H	A	P	L	A	R	N
Template Known Secondary structure		S	S		T	T	S						T	T														S	S										T					T		S	S						S	S				T	T	B				B			S	S	S			B				S				S	T
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		608	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.									.
Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.	.	.
Query Sequence		A	M	L	L	G	A	L	N	L	T	P	I	E	V	A	Q	A	F	Q	T	I	A	S	G	G	N	R	A	P	L	S	A	L	R	S	V	I	A	E	D	G	K	V	L	Y	Q	S	F	P	Q	A	E	R	A	V	P	A	Q	A	A	Y	L	T	L	W	T	M	Q	Q	V	V	.	.	.	.	.	.	.	.	Q
Query Conservation																																																																									.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	V	P	A	A	Y	I	H	S	T	L	P	D	M	E	I	W	I	D	A	W	L	H	R	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	P	A	T	L	R	E	A	M	S	N	S	W	R	G	N	S	D	V	P	L	A	A	D	N	R
Template Known Secondary structure		T					T																	T	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S												T					S	S				S	S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.																													.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	T	G	R	Q	L	G	A	K	Y	P	N	L	H	L	A	G	K	T	G	T	T	N	N	N	V	D	T	W	F	A	G	I	D	G	S	T	V	T	I	T	W	V	G	R	D	N	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	Y	A	S	G	W	F	I	D	Q	N	Q	G	P	Y	I	S	H	G	G	Q	N	P	N	F	S	S	C	I	A	L	R	P	D	Q	Q	I	G	I	V	A	L	A	N	M	N	S	N
Template Known Secondary structure						S	S						T	T	S										S	S									G	G	G	T								S	B
Template Predicted Secondary structure
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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