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Job DescriptionP02919
Confidence97.87%DateThu Jan 5 10:57:35 GMT 2012
Rank84Aligned Residues155
% Identity12%Templatec3humB_
PDB info PDB header:hydrolase/antibioticsChain: B: PDB Molecule:penicillin-binding protein 4; PDBTitle: crystal structure of penicillin binding protein 4 from2 staphylococcus aureus col in complex with cefotaxime
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   459460.........470.........480.........490.........500.........510.........520.........530........
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Query Sequence  PALKKQRKLSDLETAIVVVDRFSGEVRAMVGGSEPQFAGYNRAMQARRSIGSLAKPATYLTALSQPKIYRLNTWIADAPI
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Template Sequence  NQYGYAGLSAAYEPTSAVNVSQTGQLLY. . . . . . . . . . . . QYNIDTKWNPASMTKLMTMYLTLEA. . . VNKGQLSLDDTV
Template Known Secondary structure  TT
TT

GGG

STT
B............STT


GGGG...TTSS
TT
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   36...40.........50.........60... ......70.........80........ .90.........100
 
   539540.........550.........560. ...... ..570.........580..... ....590.........600.......
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Query Sequence  ALRQPNGQVWSPQNDDRRYSESG. RVMLVD. . . . ALTRSMNVPTVNLGMALG. . . . . . LPAVTETWIKLGVPKDQLHPVP
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Template Sequence  TMTNKEYIMSTLPELSNTKLYPGQVWTIADLLQITVSNSSNAAALILAKKVSKNTSDFVDLMNNKAKAIGMKNTHFVNPT
Template Known Secondary structure 

TT
TT






TT
S

SSST
TT
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   101........110.........120.........130.........140.........150.........160.........170.........180
 
   608.610... ......620........
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Query Sequence  AMLLGA. . . . . . . . . . . . . . LNLTPIEVAQAFQTI
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Template Sequence  GAENSRLRSFAPTKYKDQERTVTTARDYAILDLHV
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S
GGGS
GGGTT



B
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   181........190.........200.........210.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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