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Job DescriptionP02919
Confidence99.79%DateThu Jan 5 10:57:35 GMT 2012
Rank47Aligned Residues249
% Identity18%Templatec3dw0B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:class a carbapenemase kpc-2; PDBTitle: crystal structure of the class a carbapenemase kpc-2 at 1.62 angstrom resolution
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  EGIPALKKQRKLSDLETAIVVVDRFSGEVRAMVGGSEPQFAGYNRAMQARRSIGSLAKPATYLTALS. . . QPKIYRLNTW
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Template Sequence  EPFAKLEQDFGGS. . . IGVYAMDTGSGATVSYRAEE. . . . . . . . . . . . . RFPLCSSFKGFLAAAVLARSQQQAG. LLDTP
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TS...TTT

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GGGTTSTT.TTT
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Query Sequence  IADAPIALRQPNGQVWSPQNDDRRYSESGRVMLVDALTRSMNVPTVNLGMALG. LPAVTETWIKLGVPKDQLH. . . . . . P
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Template Sequence  IRYGKNALVPWSPISE. . KYLTTGMT. . VAELSAAAVQYSDNAAANLLLKELGGPAGLTAFMRSIGDTTFRLDRWELELN
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GGG

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TTGGG
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   95....100.........110 ........ .120.........130.........140.........150.........160.........170
 
   606...610.........620.........630.........640.........650.........660.........670.........680.....
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Query Sequence  VPAMLLGALNLTPIEVAQAFQTIASGGNRAPLSALRSVIAEDGKVLYQSFPQAERAVPAQAAYLTLWTMQQVVQRGTGRQ
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Template Sequence  SAIPGDARDTSSPRAVTESLQKLTL. . . . . . . . . . . . . . . . . . . . . . . . . . . . GSALAAPQRQQFVDWLKGNTTGNHRIR
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Query Sequence  LGAKYPNLHLAGKTGTTNNNVDTWFAGI. . . . . DGSTVTITWVGRDNNQPTKLYGASGAMSIYQRYLANQTPTPLN
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Template Sequence  A. AVPADWAVGDKTGTCGVYGTANDYAVVWPTGRAPIVLAVYTRAPNKDDK. . HSEAVIAAAARLALEGLGVNGQQ
Template Known Secondary structure  G.GS
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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