Return to main results Retrieve Phyre Job Id

Job DescriptionP02919
Confidence95.42%DateThu Jan 5 10:57:35 GMT 2012
Rank102Aligned Residues164
% Identity20%Templatec2wzzA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:beta-lactamase; PDBTitle: amp-c beta-lactamase (pseudomonas aeruginosa)in complex2 with compound m-03
Resolution1.57 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   445....450.........460.........470.........480.........490.........500.........510.........520.
Predicted Secondary structure 





























...
Query SS confidence 












































































. . .
Query Sequence  VAQDAAEKAAVEGIPALKKQRKLSDLETAIVVVDRFSGEVRAMVGGSEPQFAGYNRAMQARRSIGSLAKPATYLTAL. . .
Query Conservation   

  

 

   
  
        



 




 









 
      


  
 








 





...
Alig confidence 




















......






..








































...
Template Conservation       

  
          
......  
 
  .. 
 
     
  
       
 

 
 
 



  

     

Template Sequence  RLKALVDAAVQPVMKANDIPG. . . . . . LAVAISL. . KGEPHYFSYGLASKEDGRRVTPETLFEIGSVSKTFTATLAGYAL
Template Known Secondary structure  TT
S........TTBS
TTT

B

TT

GGG
Template Predicted Secondary structure 



........














Template SS confidence 















































































   33......40.........50... ......60 .........70.........80.........90.........100....
 
   522.......530.........540.........550.........560.........570..
Predicted Secondary structure 





























.............................
Query SS confidence 


















































. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  SQPKIYRLNTWIADAPIALRQPNGQVWSPQNDDRRYSESGRVMLVDALTRS. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation 
 
   
  
 
 
 
       
  
 
 


      
 


  


 
.............................
Alig confidence 




.







............









...











.............................
Template Conservation 
 
 
. 


 
  ............ 

       ...  


  







                          
Template Sequence  TQDKM. RLDDRASQ. . . . . . . . . . . . HWPALQGSRF. . . DGISLLDLATYTAGGLPLQFPDSVQKDQAQIRDYYRQWQPT
Template Known Secondary structure  TTS
.
TTSBGGG............G
GGGTTSGG...GG
BTT
SS


SS

TT

S



S
Template Predicted Secondary structure 



.




............





...
























Template SS confidence 















































































   105.... 110....... ..120....... ..130.........140.........150.........160........
 
   573......580. ........590..... .... 600.........610.
Predicted Secondary structure  .........
...

.....



........................








Query SS confidence  . . . . . . . . .








. . .













. . . . .



. . . . . . . . . . . . . . . . . . . . . . . .











Query Sequence  . . . . . . . . . MNVPTVNLG. . . MALGLPAVTETWIK. . . . . LGVP. . . . . . . . . . . . . . . . . . . . . . . . KDQLHPVPAMLL
Query Conservation  ......... 

  
 
 ...  

 
 
      .....


 ........................       




Alig confidence  .........








...













.....



........................











Template Conservation    

    


    


 


  

          
  



  
              
                   
Template Sequence  YAPGSQRLYSNPSIGLFGYLAARSLGQPFERLMEQQVFPALGLEQTHLDVPEAALAQYAQGYGKDDRPLRVGPGPLDAEG
Template Known Secondary structure  S
TTT


TTS
TTT
SSSS

GGGGGGB


B
GGG
B





TT
Template Predicted Secondary structure 













































Template SS confidence 















































































   169170.........180.........190.........200.........210.........220.........230.........240........
 
   612.......620.........630..
Predicted Secondary structure 








Query SS confidence 




















Query Sequence  GALNLTPIEVAQAFQTIASGG
Query Conservation 
   






 








Alig confidence 




















Template Conservation 


 

  
       

   
Template Sequence  YGVKTSAADLLRFVDANLHPE
Template Known Secondary structure 


GG
Template Predicted Secondary structure 








Template SS confidence 




















   249250.........260.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions