Job Description P02919 Confidence 99.87% Date Thu Jan 5 10:57:35 GMT 2012 Rank 38 Aligned Residues 255 % Identity 15% Template c2wuqA_ PDB info PDB header:transcription Chain: A: PDB Molecule:beta-lactamase regulatory protein blab; PDBTitle: crystal structure of blab protein from streptomyces cacaoi Resolution 1.80 Å

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		444	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		S	V	A	Q	D	A	A	E	K	A	A	V	E	G	I	P	A	L	K	K	Q	R	K	L	S	D	L	E	T	A	I	V	V	V	D	R	F	S	G	E	V	R	A	M	V	G	G	S	E	P	Q	F	A	G	Y	N	R	A	M	Q	A	R	R	S	I	G	S	L	A	K	P	A	T	Y	L	T	A	L	S	.
Query Conservation																																																																																	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	S	L	L	R	E	L	R	D	A	L	H	E	.	.	.	.	.	.	.	.	.	.	.	G	G	L	T	G	S	F	L	V	R	D	L	Y	T	G	E	E	L	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	D	T	E	L	P	T	A	S	L	V	K	L	P	L	A	L	A	T	L	E	R
Template Known Secondary structure															.	.	.	.	.	.	.	.	.	.	.	T	T										T	T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	T						G	G	G	G
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.												.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.														.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
				523	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	Q	P	K	I	Y	R	L	N	T	W	I	A	D	A	P	I	A	L	R	Q	P	N	G	Q	V	W	S	P	Q	N	D	D	R	R	Y	S	E	S	G	R	V	M	L	V	D	A	L	T	R	S	M	N	V	P	T	V	N	L	G	M	A	L	G	L	P	A	V	T	E	T	W	I	K	L	G	V	P	K
Query Conservation		.	.
Alig confidence		.	.					.																																.	.
Template Conservation								.																																.	.
Template Sequence		I	R	L	G	E	V	.	D	G	A	Q	Q	I	E	V	A	P	G	R	I	T	T	P	G	P	T	G	L	S	R	F	R	H	P	A	R	V	A	.	.	V	D	D	L	L	Y	L	S	T	S	V	S	D	G	T	A	S	D	A	L	F	E	I	T	P	P	A	Q	V	E	Q	M	V	R	E	W	G	F	R	D
Template Known Secondary structure				T	T	S	S	.		T	T												S	S	S			G	G	G	G		S	S						.	.											S													S												T	T			S
Template Predicted Secondary structure								.																																.	.
Template SS confidence
		61	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		601	.	.	.								.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.
Query Sequence		D	Q	L	H	.	.	.	.	.	.	.	P	V	P	A	M	L	L	G	A	L	N	L	T	P	I	E	V	A	Q	A	F	Q	T	I	A	S	G	G	N	R	A	P	L	S	A	L	R	S	V	I	A	E	D	G	K	V	L	Y	Q	S	F	P	Q	A	E	R	A	V	P	A	Q	A	A	Y	L	T	L	W	T
Query Conservation						.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	T	V	R	H	S	M	R	E	H	R	V	P	Q	L	D	V	A	R	A	N	T	G	T	A	R	A	F	V	D	L	L	E	A	L	W	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	L	T	G	P	A	L	P	P	E	P	A	A	R	L	R	E	L
Template Known Secondary structure								T	T				S	G	G	G		T	T	T	S																	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.																									.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		674	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.				.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750
Predicted Secondary structure																																													.	.	.
Query SS confidence																																													.	.	.
Query Sequence		M	Q	Q	V	V	Q	R	G	T	G	R	Q	L	G	A	K	Y	P	N	L	H	L	A	G	K	T	G	T	T	N	N	N	V	D	T	W	F	A	G	I	D	G	S	.	.	.	T	V	T	I	T	W	V	G	R	D	N	N	Q	P	T	K	L	Y	G	A	S	G	A	M	S	I	Y	Q	R	Y	L	A	N	Q
Query Conservation																																													.	.	.
Alig confidence															.																														.	.	.
Template Conservation															.
Template Sequence		M	A	A	N	L	L	R	H	R	L	A	P	D	.	F	A	S	D	A	A	T	W	S	S	K	T	G	T	L	L	N	L	R	H	E	V	G	V	V	E	H	A	D	G	Q	V	F	A	V	A	V	L	T	E	S	Q	V	P	A	D	S	Q	P	G	A	E	A	L	M	A	Q	V	A	R	R	L	R	D	R	L
Template Known Secondary structure				T					S	S	S				.			B	T	T											T	T											T	T	S												S	S			S
Template Predicted Secondary structure															.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions