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Job DescriptionP02919
Confidence100.00%DateThu Jan 5 10:57:35 GMT 2012
Rank32Aligned Residues230
% Identity17%Templatec2jc7A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:beta-lactamase oxa-24; PDBTitle: the crystal structure of the carbapenemase oxa-24 reveals2 new insights into the mechanism of carbapenem-hydrolysis
Resolution2.5 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   447..450.........460.........470.........480.........490.........500.........510.........520......
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Query Sequence  QDAAEKAAVEGIPALKKQRKLSDLETAIVVVDRFSGEVRAMVGGSEPQFAGYNRAMQARRSIGSLAKPATYLTALSQPKI
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Template Sequence  SQQHEKAIKSYFDEAQTQ. . . . . . . GVIIIKEGKNLSTYG. . . . . . . . . NALARANKE. YVPASTFKMLNALIGLENHKA
Template Known Secondary structure  TTS
.......TT.........S
GGGGG

.B

GGGGTTS
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   35....40.........50.. .......60....... ..70...... ...80.........90.......
 
   527..530.........540.........550.........560.........570.........580.........590.........600......
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Query Sequence  YRLNTWIADAPIALRQPNGQVWSPQNDDRRYSESGRVMLVDALTRSMNVPTVNLGMALGLPAVTETWIKLGVPKDQLHPV
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Template Sequence  . TTNEIFKWDGKK. . . . . . . . RTYPMW. . . . . . EKDMTLGEAMALSAVPVYQELARRTGLELMQKEVKRVNFGNTNIGTQ
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SS

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SS
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SSGGG......SS
B
T

T
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TT
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   98.100......... 110..... ....120.........130.........140.........150.........160..
 
   607..610. ........620.........630.........640.........650.........660.........670.........680....
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Query Sequence  PAMLL. . GALNLTPIEVAQAFQTIASGGNRAPLSALRSVIAEDGKVLYQSFPQAERAVPAQAAYLTLWTMQQVVQRGTGR
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Template Sequence  VDNFWLVGPLKITPVQEVNFADDLAHNRLP. . . . . . . . . . . . . . . . . . . . . . . . . . . FKLETQEEVKKMLLIKEVNGSK.
Template Known Secondary structure  TTTSS

B
TT
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   163......170.........180.........190.. .......200.........210....
 
   685....690.........700. ........710...... ...720.........730.........740.........750.
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Query Sequence  QLGAKYPNLHLAGKTGT. . TNNNVDTWFAGIDGS. . . . . TVTITWVGRDNNQPTKLYGASGAMSIYQRYLANQT
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Template Sequence  . . . . . . . . . . IYAKSGWGMGVTPQVGWLTGWVEQANGKKIPFSLNLEMKEGM. . . . . SGSIRNEITYKSLENLG
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   215....220.........230.........240.........250...... ...260.........270...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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