Job Description P02919 Confidence 100.00% Date Thu Jan 5 10:57:35 GMT 2012 Rank 26 Aligned Residues 216 % Identity 18% Template c2iwdA_ PDB info PDB header:antibiotic resistance Chain: A: PDB Molecule:methicillin resistance mecr1 protein; PDBTitle: oxacilloyl-acylated mecr1 extracellular antibiotic-sensor2 domain. Resolution 2.4 Å

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		468	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	L	E	T	A	I	V	V	V	D	R	F	S	G	E	V	R	A	M	V	G	G	S	E	P	Q	F	A	G	Y	N	R	A	M	Q	A	R	R	S	I	G	S	L	A	K	P	A	T	Y	L	T	A	L	S	Q	P	K	I	Y	R	L	N	T	W	I	A	D	A	P	I	A	L	R	Q	P	N	G	Q	V
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.
Template Sequence		K	G	F	D	G	S	F	V	L	Y	N	E	R	E	Q	A	Y	S	I	.	.	.	.	.	.	.	.	.	.	.	Y	N	E	P	E	S	K	Q	R	Y	S	P	N	T	Y	K	I	Y	L	A	L	M	A	F	D	Q	N	L	L	S	L	N	H	T	E	Q	Q	W	.	.	.	.	.	.	.	.	D	K	H	Q
Template Known Secondary structure		T	T	S									T	T	T	T					.	.	.	.	.	.	.	.	.	.	.		S						B							T											T	T	S	S	B	T	T	B			B			.	.	.	.	.	.	.	.
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.
Template SS confidence
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.												.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.									.	.	.	.
		548	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.		.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		W	S	P	Q	N	D	D	R	R	Y	S	E	S	G	R	V	M	L	V	D	A	L	T	R	S	M	N	V	P	T	V	N	L	G	M	A	L	G	L	P	A	V	T	E	T	W	I	K	L	G	V	P	K	D	Q	L	H	.	P	V	P	A	M	L	L	G	A	L	N	L	T	P	I	E	V	A	Q	A	F	Q
Query Conservation																																																											.
Alig confidence								.	.	.	.	.	.																																														.
Template Conservation								.	.	.	.	.	.
Template Sequence		Y	P	F	K	E	W	.	.	.	.	.	.	N	Q	D	Q	N	L	N	S	S	M	K	Y	S	V	N	W	Y	Y	E	N	L	N	K	H	L	R	Q	D	E	V	K	S	Y	L	D	L	I	E	Y	G	N	E	E	I	S	G	N	E	N	Y	W	N	E	S	S	L	K	I	S	A	I	E	Q	V	N	L	L	K
Template Known Secondary structure			S	S	G	G	G	.	.	.	.	.	.	S	S		B								T	T												S													T		T	T					S		T	T	T	T	S	S	S	S
Template Predicted Secondary structure								.	.	.	.	.	.
Template SS confidence
		421	.	.	.	.	.							.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.
		627	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		T	I	A	S	G	G	N	R	A	P	L	S	A	L	R	S	V	I	A	E	D	G	K	V	L	Y	Q	S	F	P	Q	A	E	R	A	V	P	A	Q	A	A	Y	L	T	L	W	T	M	Q	Q	V	V	Q	R	G	T	G	R	Q	L	G	A	K	Y	P	N	L	H	L	A	G	K	T	G	T	T	N	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.												.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	M	K	Q	H	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	H	F	D	N	K	A	I	E	K	V	E	N	S	M	T	L	K	Q	K	D	T	.	.	.	.	.	.	.	.	.	.	.	Y	K	Y	V	G	K	T	G	T	G	I	V	N	H
Template Known Secondary structure					T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S												T						S	S	.	.	.	.	.	.	.	.	.	.	.													T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		495	.	.	.	.	500																												.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.												.	.	.	.	.	.	.	530	.	.	.	.	.	.
		704	.	.	.	.	.	710	.	.	.					.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.
Predicted Secondary structure												.	.	.	.
Query SS confidence												.	.	.	.
Query Sequence		N	N	V	D	T	W	F	A	G	I	.	.	.	.	D	G	S	T	V	T	I	T	W	V	G	R	D	N	N	Q	P	T	K	L	Y	G	A	S	G	A	M	S	I	Y	Q	R	Y	L	A	N	Q	T
Query Conservation												.	.	.	.
Alig confidence												.	.	.	.																	.	.	.	.	.
Template Conservation																																.	.	.	.	.
Template Sequence		K	E	A	N	G	W	F	V	G	Y	V	E	T	K	D	N	T	Y	Y	F	A	T	H	L	K	G	E	D	N	A	.	.	.	.	.	N	G	E	K	A	Q	Q	I	S	E	R	I	L	K	E	M	E
Template Known Secondary structure															S	S												S	S		B	.	.	.	.	.	S															T	T
Template Predicted Secondary structure																																.	.	.	.	.
Template SS confidence
		537	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.						.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions