Job Description P02919 Confidence 98.91% Date Thu Jan 5 10:57:35 GMT 2012 Rank 66 Aligned Residues 205 % Identity 22% Template c2bcfA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:probable d-alanyl-d-alanine carboxypeptidase PDBTitle: crystal structure of a evolved putative penicillin-binding2 protein homolog, rv2911, from mycobacterium tuberculosis. Resolution 2.30 Å

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		473	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	V	V	V	D	R	F	S	G	E	V	R	A	M	V	G	G	S	E	P	Q	F	A	G	Y	N	R	A	M	Q	A	R	R	S	I	G	S	L	A	K	P	A	T	Y	L	T	A	L	S	Q	P	K	I	Y	R	L	N	T	W	I	A	D	A	P	I	A	L	R	Q	P	N	G	Q	V	W	S	P	Q	N
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.																						.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.																						.	.	.	.
Template Sequence		T	W	I	V	A	D	L	D	S	G	Q	V	L	A	G	R	D	Q	.	.	.	.	.	.	.	.	.	.	.	.	N	V	A	H	P	P	A	S	T	I	K	V	L	L	A	L	V	A	L	D	E	L	.	.	.	D	L	N	S	T	V	V	A	D	V	A	D	T	Q	A	E	C	N	C	V	G	.	.	.	.
Template Known Secondary structure								T	T	T								S	T	.	.	.	.	.	.	.	.	.	.	.	.	T			B			G	G	G														.	.	.		T	T							T	G	G	G			S	S					.	.	.	.
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.																						.	.	.	.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.													.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.				.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		553	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570					.	.	.	.	.	.	.	.	.	580	.	.	.	.	.						.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610			.	.	.	.	.	.	.	.	.	620	.
Predicted Secondary structure																				.	.	.	.																.	.	.	.	.																										.	.
Query SS confidence																				.	.	.	.																.	.	.	.	.																										.	.
Query Sequence		D	D	R	R	Y	S	E	S	G	R	V	M	L	V	D	A	L	T	.	.	.	.	R	S	M	N	V	P	T	V	N	L	G	M	A	L	G	.	.	.	.	.	L	P	A	V	T	E	T	W	I	K	L	G	V	P	K	D	Q	L	H	P	V	P	A	M	L	.	.	L	G	A	L	N	L	T	P	I	E	V
Query Conservation																				.	.	.	.																.	.	.	.	.																										.	.
Alig confidence		.	.	.	.															.	.	.	.																.	.	.	.	.																										.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	V	K	P	G	R	S	Y	T	V	R	Q	L	L	D	G	L	L	L	V	S	G	N	D	A	A	N	T	L	A	H	X	L	G	G	Q	D	V	T	V	A	K	X	N	A	K	A	A	T	L	G	A	T	S	T	H	A	T	T	P	S	G	L	D	G	P	G	G	S	G	A	S	T	A	H	D	L
Template Known Secondary structure		.	.	.	.			T	T															S													T	T																	T		T	T		B		S	S	S	S	S	S		B	T	T	B	S		B	B
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		622	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	A	F	Q	T	I	A	S	G	G	N	R	A	P	L	S	A	L	R	S	V	I	A	E	D	G	K	V	L	Y	Q	S	F	P	Q	A	E	R	A	V	P	A	Q	A	A	Y	L	T	L	W	T	M	Q	Q	V	V	Q	R	G	T	G	R	Q	L	G	A	K	Y	P	N	L	H	L	A	G	K	T	G	T
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	I	F	R	A	A	X	A	N	P	V	F	A	Q	I	I	A	E	P	S	A	X	F	P	S	D	E	Q	L	I	V	N	Q	D	E	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	R	Y	P	G	A	I	G	G	K	T	G	Y
Template Known Secondary structure											S										S																T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	T	T
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.																														.	220	.	.	.	.	.	.	.	.	.	230	.
		702	.	.	.	.	.	.	.	710	.	.	.	.	.				.	.	.	.	720	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.
Query SS confidence																.	.	.
Query Sequence		T	N	N	N	V	D	T	W	F	A	G	I	D	G	.	.	.	S	T	V	T	I	T	W	V	G	R	D	N	N	Q
Query Conservation																.	.	.
Alig confidence																.	.	.
Template Conservation
Template Sequence		T	N	A	A	R	K	T	F	V	G	A	A	A	R	G	G	R	R	L	V	I	A	X	X	Y	G	L	V	K	E	G
Template Known Secondary structure			T	T	T											T	T														T	T
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions