Job Description P02919 Confidence 97.90% Date Thu Jan 5 10:57:35 GMT 2012 Rank 83 Aligned Residues 145 % Identity 12% Template c1tvfA_ PDB info PDB header:penicillin binding Chain: A: PDB Molecule:penicillin binding protein 4; PDBTitle: crystal structure of penicillin-binding protein 4 (pbp4)2 from staphylococcus aureus Resolution 2.00 Å

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		467	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.				.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.
Predicted Secondary structure																																																										.	.	.
Query SS confidence																																																										.	.	.
Query Sequence		L	S	D	L	E	T	A	I	V	V	V	D	R	F	S	G	E	V	R	A	M	V	G	G	S	E	P	Q	F	A	G	Y	N	R	A	M	Q	A	R	R	S	I	G	S	L	A	K	P	A	T	Y	L	T	A	L	S	.	.	.	Q	P	K	I	Y	R	L	N	T	W	I	A	D	A	P	I	A	L	R	Q	P
Query Conservation																																																										.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.					.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.																																.
Template Sequence		S	A	A	Y	E	P	T	S	A	V	N	V	S	Q	T	G	Q	L	L	Y	.	.	.	.	.	.	.	.	.	.	.	.	Q	Y	N	I	D	T	K	W	N	P	A	S	M	T	K	L	M	T	M	Y	L	T	L	E	A	V	N	K	G	Q	L	.	S	L	D	D	T	V	T	M	T	N	K	E	Y	I	M	S
Template Known Secondary structure			G	G	G			S							T	T	S	B				.	.	.	.	.	.	.	.	.	.	.	.			S	T	T			B			G	G	G															T	T	S	S	.		T	T													T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.																																.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.													.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		544	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.					.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.							.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610
Predicted Secondary structure																										.	.	.	.																			.	.	.	.	.	.																										.	.	.
Query SS confidence																										.	.	.	.																			.	.	.	.	.	.																										.	.	.
Query Sequence		N	G	Q	V	W	S	P	Q	N	D	D	R	R	Y	S	E	S	G	R	V	M	L	V	D	.	.	.	.	A	L	T	R	S	M	N	V	P	T	V	N	L	G	M	A	L	G	.	.	.	.	.	.	L	P	A	V	T	E	T	W	I	K	L	G	V	P	K	D	Q	L	H	P	V	P	A	M	L	.	.	.
Query Conservation																										.	.	.	.																			.	.	.	.	.	.																										.	.	.
Alig confidence															.	.	.	.								.	.	.	.																			.	.	.	.	.	.																										.	.	.
Template Conservation															.	.	.	.
Template Sequence		T	L	P	E	L	S	N	T	K	L	Y	P	G	.	.	.	.	Q	V	W	T	I	A	D	L	L	Q	I	T	V	S	N	S	S	N	A	A	A	L	I	L	A	K	K	V	S	K	N	T	S	D	F	V	D	L	M	N	N	K	A	K	A	I	G	M	K	N	T	H	F	V	N	P	T	G	A	E	N	S	R
Template Known Secondary structure		T		T	T	S							T	T	.	.	.	.															S														S	S	S															T	T		T	T		B		S	S	S	S	S	S
Template Predicted Secondary structure															.	.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.					.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
													611	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	L	G	A	L	N	L	T	P	I	E	V	A	Q	A	F	Q	T	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	R	S	F	A	P	T	K	Y	K	D	Q	E	R	T	V	T	T	A	R	D	Y	A	I	L	D	L	H	V
Template Known Secondary structure			G	G	G	S		G	G	G	T	T					B	B
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions