Job Description P75952 Confidence 99.86% Date Thu Jan 5 12:16:21 GMT 2012 Rank 45 Aligned Residues 184 % Identity 17% Template c3rh2A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:hypothetical tetr-like transcriptional regulator; PDBTitle: crystal structure of a hypothetical tetr-like transcriptional2 regulator (sama_0099) from shewanella amazonensis sb2b at 2.42 a3 resolution Resolution 2.42 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	D	A	A	L	D	K	A	M	K	L	F	W	Q	H	G	Y	E	A	T	S	L	A	D	L	V	E	A	T	G	A	K	A	P	T	L	Y	A	E	F	T	N	K	E	G	L	F	R	A	V	L	D	R	Y	I	D	R	F	A	A	K	H	E	A	Q	L	F	C	E	E	K	S	V	E	S	A	L	A	D
Query Conservation
Alig confidence																																																																				.	.
Template Conservation																																																																				.	.
Template Sequence		T	R	D	K	I	I	Q	A	S	L	E	L	F	N	E	H	G	E	R	T	I	T	T	N	H	I	A	A	H	L	D	I	S	P	G	N	L	Y	Y	H	F	R	N	K	E	D	I	I	R	C	I	F	D	Q	Y	E	Q	H	L	L	L	G	F	K	P	Y	.	.	A	D	Q	K	V	D	L	E	L	L	X	S
Template Known Secondary structure																			G	G	G											T											S	S																				T				.	.	S	S				S
Template Predicted Secondary structure																																																																				.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		Y	F	A	A	I	A	N	C	F	T	S	K	D	T	P	A	G	C	F	M	I	N	N	C	T	T	L	S	P	D	S	G	D	I	A	N	T	L	K	S	R	H	A	M	Q	E	R	T	L	Q	Q	F	L	C	Q	R	Q	A	R	G	E	I	P	P	H	.	C	D	V	T	H	L	A	E	F	L	N	C	I	I
Query Conservation																																																																			.
Alig confidence																												.	.	.	.	.																																			.
Template Conservation																												.	.	.	.	.
Template Sequence		Y	F	D	A	X	F	Y	T	X	W	Q	F	R	F	X	Y	A	N	L	A	D	I	L	A	R	D	.	.	.	.	.	D	T	L	K	A	R	Y	L	K	V	Q	Q	A	V	L	E	Q	S	I	A	V	L	N	Q	L	K	K	D	G	I	L	Q	I	E	D	E	R	I	A	D	L	A	D	T	I	K	X	I	I
Template Known Secondary structure													T						S							T		.	.	.	.	.																												T	T	S	B				G	G	G
Template Predicted Secondary structure																												.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.						.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		179	180						.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure				.	.	.	.	.
Query SS confidence				.	.	.	.	.
Query Sequence		Q	G	.	.	.	.	.	M	S	I	S	A	R	E	G	A	S	L	E	K	L	M	Q	I	A	G	T	T	L	R	L	W	P	E	L	V	K
Query Conservation				.	.	.	.	.
Alig confidence				.	.	.	.	.
Template Conservation
Template Sequence		G	F	W	I	S	Y	K	L	T	Q	S	S	I	A	T	I	S	K	A	S	L	Y	E	G	L	L	R	V	L	X	I	F	K	A	Y	S	T
Template Known Secondary structure												S	S																						T	T	B
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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