Job Description P75952 Confidence 99.82% Date Thu Jan 5 12:16:21 GMT 2012 Rank 71 Aligned Residues 185 % Identity 14% Template c3nnrA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: crystal structure of a tetr-family transcriptional regulator2 (maqu_3571) from marinobacter aquaeolei vt8 at 2.49 a resolution Resolution 2.49 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	R	D	A	A	L	D	K	A	M	K	L	F	W	Q	H	G	Y	E	A	T	S	L	A	D	L	V	E	A	T	G	A	K	A	P	T	L	Y	A	E	F	T	N	K	E	G	L	F	R	A	V	L	D	R	Y	I	D	R	F	A	A	K	H	E	A	Q	L	F	C	E	E	K	S	V	E	S	A	L	A
Query Conservation
Alig confidence																																																																					.	.
Template Conservation																																																																					.	.
Template Sequence		K	T	R	D	K	I	L	L	S	S	L	E	L	F	N	D	K	G	E	R	N	I	T	T	N	H	I	A	A	H	L	A	I	S	P	G	N	L	Y	Y	H	F	R	N	K	S	D	I	I	Y	E	I	F	Q	E	Y	E	K	L	V	D	Y	Y	L	D	I	P	.	.	E	D	R	P	I	T	L	E	D	X	T
Template Known Secondary structure																				G	G	G											T											S	S																				T				.	.	S	S	S
Template Predicted Secondary structure																																																																					.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.	.	80	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.
Predicted Secondary structure																																																																											.
Query SS confidence																																																																											.
Query Sequence		D	Y	F	A	A	I	A	N	C	F	T	S	K	D	T	P	A	G	C	F	M	I	N	N	C	T	T	L	S	P	D	S	G	D	I	A	N	T	L	K	S	R	H	A	M	Q	E	R	T	L	Q	Q	F	L	C	Q	R	Q	A	R	G	E	I	P	P	H	C	D	V	T	H	L	A	.	E	F	L	N	C	I
Query Conservation																																																																											.
Alig confidence																													.	.	.	.	.																																										.
Template Conservation																													.	.	.	.	.
Template Sequence		F	Y	L	E	S	V	F	D	G	L	W	S	Y	R	F	F	H	R	D	L	E	Y	L	L	D	S	D	.	.	.	.	.	P	R	L	R	Q	D	Y	R	E	F	T	N	R	C	L	A	A	I	N	R	I	F	A	K	L	A	D	A	G	I	I	Q	P	Q	P	E	D	L	R	S	A	X	S	L	N	V	W	L
Template Known Secondary structure														T						S									.	.	.	.	.																												T	T	S	B
Template Predicted Secondary structure																													.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.						.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Q	G	M	S	I	S	A	R	E	G	A	S	L	E	K	L	M	Q	I	A	G	T	T	L	R	L	W	P	E	L	V	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	I	T	N	W	X	A	F	L	K	T	A	H	L	T	E	L	K	Q	G	I	Y	Q	V	L	T	L	E	V	P	Y	L	T
Template Known Secondary structure					T												S	G	G	G										G	G	G	B
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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