Job Description P75952 Confidence 99.74% Date Thu Jan 5 12:16:21 GMT 2012 Rank 106 Aligned Residues 169 % Identity 15% Template c3ni7A_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:bacterial regulatory proteins, tetr family; PDBTitle: crystal structure of the tetr transcriptional regulator from2 nitrosomonas europaea atcc 19718 Resolution 2.78 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	D	R	D	A	A	L	D	K	A	M	K	L	F	W	Q	H	G	Y	E	A	T	S	L	A	D	L	V	E	A	T	G	A	K	A	P	T	L	Y	A	E	F	T	N	K	E	G	L	F	R	A	V	L	D	R	Y	I	D	R	F	A	A	K	H	E	A	Q	L	F	C	E	E	K	S	V	E	S	A	L
Query Conservation
Alig confidence																																																																												.
Template Conservation																																																																												.
Template Sequence		D	P	X	R	D	A	I	V	D	T	A	V	E	L	A	A	H	T	S	W	E	A	V	R	L	Y	D	I	A	A	R	L	A	V	S	L	D	E	I	R	L	Y	F	R	E	K	D	E	L	I	D	A	W	F	D	R	A	D	S	R	X	L	K	E	A	E	S	A	G	F	L	D	L	V	.	A	S	E	R	I
Template Known Secondary structure																			S		S	T	T										T	T	S										S	S																				T	T	S	T	T	G	G	G	S		.
Template Predicted Secondary structure																																																																												.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	Y	F	A	A	I	A	N	C	F	T	S	K	D	T	P	A	G	C	F	M	I	N	N	C	T	T	L	S	P	D	S	G	D	I	A	N	T	L	K	S	R	H	A	M	Q	E	R	T	L	Q	Q	F	L	C	Q	R	Q	A	R	G	E	I	P	P	H	C	D	V	T	H	L	A	E	F	L	N	C	I
Query Conservation
Alig confidence																		.	.	.	.	.																																			.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.																																			.	.	.	.	.	.	.	.	.
Template Sequence		H	H	L	I	X	I	W	L	D	A	L	A	V	Q	R	K	.	.	.	.	.	V	T	R	Q	X	I	X	S	K	L	E	H	I	H	I	Q	I	P	A	V	X	R	V	S	R	T	V	Q	W	V	R	E	A	A	.	.	.	.	.	.	.	.	.	Q	R	A	L	E	E	S	T	L	T	T	I	Y	L	X	T
Template Known Secondary structure														T	T			.	.	.	.	.									S																									T	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.	.	.	.	.																																			.	.	.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100						.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.										.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Q	G	M	S	I	S	A	R	E	G	A	S	L	E	K	L	M	Q	I	A	G	T	T	L	R
Query Conservation
Alig confidence			.	.
Template Conservation			.	.
Template Sequence		F	.	.	F	F	W	X	R	D	E	S	E	N	S	R	H	T	R	Q	F	L	K	R	H	L	T
Template Known Secondary structure			.	.					T			S	G	G	G
Template Predicted Secondary structure			.	.
Template SS confidence
		160			.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions