Job Description P75952 Confidence 99.82% Date Thu Jan 5 12:16:21 GMT 2012 Rank 70 Aligned Residues 189 % Identity 15% Template c3lsjA_ PDB info PDB header:transcription Chain: A: PDB Molecule:dest; PDBTitle: crystal structure of dest in complex with palmitoyl-coa Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		K	S	R	G	R	P	K	V	F	D	R	D	A	A	L	D	K	A	M	K	L	F	W	.	Q	H	G	Y	E	A	T	S	L	A	D	L	V	E	A	T	G	A	K	A	P	T	L	Y	A	E	F	T	N	K	E	G	L	F	R	A	V	L	D	R	Y	I	D	R	F	A	A	K	H	E	A	Q	L	F	C	E
Query Conservation																									.
Alig confidence																									.
Template Conservation
Template Sequence		S	P	R	A	E	Q	K	Q	Q	T	R	H	A	L	M	S	A	A	R	H	L	M	E	S	G	R	G	F	G	S	L	S	L	R	E	V	T	R	A	A	G	I	V	P	A	G	F	Y	R	H	F	S	D	M	D	Q	L	G	L	A	L	V	A	E	V	D	E	T	F	R	A	T	L	R	A	V	R	R	N	E
Template Known Secondary structure			T	T																			T	T	T	S			G	G	G											T	S		G	G	G	G	T	T	T		S	S														T	T									T	T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	S	V	E	S	A	L	A	D	Y	F	A	A	I	A	N	C	F	T	S	K	D	T	P	A	G	C	F	M	I	N	N	C	T	T	L	S	P	D	S	G	D	I	A	N	T	L	K	S	R	H	A	M	Q	E	R	T	L	Q	Q	F	L	C	Q	R	Q	A	R	G	E	I	P	P	H	C	D	V	T	H
Query Conservation
Alig confidence						.	.	.	.	.	.	.																																																																	.
Template Conservation						.	.	.	.	.	.	.																																																																	.
Template Sequence		L	G	G	L	.	.	.	.	.	.	.	I	D	A	S	V	R	I	F	L	D	A	V	G	A	N	R	S	Q	F	L	F	L	A	R	E	Q	Y	G	G	S	L	P	I	R	Q	A	I	A	S	L	R	Q	R	I	T	D	D	L	A	A	D	L	A	L	L	N	K	M	P	H	L	D	G	A	.	A	L	D	V
Template Known Secondary structure						.	.	.	.	.	.	.															T										G	G	G	S	S																											T	S		T	T	S				.
Template Predicted Secondary structure						.	.	.	.	.	.	.																																																																	.
Template SS confidence
		85	.	.	.								.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190										.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.
Query Sequence		L	A	E	F	L	N	C	I	I	Q	G	M	S	I	S	A	R	E	G	A	S	.	.	.	.	.	.	.	.	.	L	E	K	L	M	Q	I	A	G	T	T	L	R	L	W	P	E
Query Conservation																							.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	A	D	L	V	V	K	T	V	F	A	T	L	P	E	L	I	D	P	P	A	A	D	L	P	P	H	L	M	P	A	A	K	I	T	H	Q	L	R	F	I	M	I	G	G	K	H
Template Known Secondary structure												T	T	G	G	G	G	S	S				T	T			G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions