Job Description P75952 Confidence 99.77% Date Thu Jan 5 12:16:21 GMT 2012 Rank 97 Aligned Residues 181 % Identity 12% Template c3kkdA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator; PDBTitle: structure of a putative tetr transcriptional regulator (pa3699) from2 pseudomonas aeruginosa pa01 Resolution 2.10 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.											70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.
Query Sequence		F	D	R	D	A	A	L	D	K	A	M	K	L	F	W	Q	H	G	Y	E	A	T	S	L	A	D	L	V	E	A	T	G	A	K	A	P	T	L	Y	A	E	F	T	N	K	E	G	L	F	R	A	.	.	.	.	.	.	.	.	.	.	V	L	D	R	Y	I	D	R	F	A	A	K	H	E	A	Q	L	F	C
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.
Alig confidence																																																					.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	R	R	Q	A	I	L	D	A	A	X	R	L	I	V	R	D	G	V	R	A	V	R	H	R	A	V	A	A	E	A	Q	V	P	L	S	A	T	D	I	D	D	L	I	T	D	T	F	A	L	F	V	E	R	N	A	E	A	L	S	A	F	W	S	S	V	E	G	D	L	Q	E	X	A	A	V	L	A	D	D
Template Known Secondary structure																				G	G	G											T	S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	K	S	V	E	S	A	L	A	D	Y	F	A	A	I	A	N	C	F	T	S	K	D	T	P	A	G	C	F	M	I	N	N	C	T	T	L	S	P	D	S	G	D	I	A	N	T	L	K	S	R	H	A	M	Q	E	R	T	L	Q	Q	F	L	C	Q	R	Q	A	R	G	E	I	P	P	H	C	D	V	T
Query Conservation
Alig confidence					.																																		.	.	.	.	.
Template Conservation					.																																		.	.	.	.	.
Template Sequence		P	G	A	.	R	G	S	L	V	E	R	I	V	E	L	A	V	Q	Y	V	Q	V	Q	L	T	E	R	R	E	H	L	L	A	E	Q	A	F	.	.	.	.	.	R	Q	E	A	L	L	N	P	R	L	R	E	L	A	D	A	H	Q	R	I	L	S	L	G	A	V	H	F	F	Q	V	L	G	S	G	Q	P	E
Template Known Secondary structure		G	G	G	.																						T	T											.	.	.	.	.					T	T																										T	T		S
Template Predicted Secondary structure					.																																		.	.	.	.	.
Template SS confidence
		120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.						.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.					.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.
Query SS confidence																			.	.	.	.
Query Sequence		H	L	A	E	F	L	N	C	I	I	Q	G	M	S	I	S	A	.	.	.	.	R	E	G	A	S	L	E	K	L	M	Q	I	A	G	T	T	L	R	L	W
Query Conservation																			.	.	.	.
Alig confidence																			.	.	.	.
Template Conservation
Template Sequence		Q	D	A	K	V	L	T	S	I	I	L	Q	X	E	Y	Q	G	L	V	D	G	V	E	Q	L	A	V	D	E	X	R	A	I	L	R	R	Y	L	N	L	V
Template Known Secondary structure																							G	G	G
Template Predicted Secondary structure
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions