Job Description P75952 Confidence 99.72% Date Thu Jan 5 12:16:21 GMT 2012 Rank 113 Aligned Residues 157 % Identity 12% Template c3egqB_ PDB info PDB header:transcription Chain: B: PDB Molecule:tetr family transcriptional regulator; PDBTitle: crystal structure of a tetr-family transcriptional regulator (af_1817)2 from archaeoglobus fulgidus at 2.55 a resolution Resolution 2.55 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	D	A	A	L	D	K	A	M	K	L	F	W	Q	H	G	Y	E	A	T	S	L	A	D	L	V	E	A	T	G	A	K	A	P	T	L	Y	A	E	F	T	N	K	E	G	L	F	R	A	V	L	D	R	Y	I	D	R	F	A	A	K	H	E	A	Q	L	F	C	E	E	K	S	V	E	S	A	L	A	D
Query Conservation
Alig confidence																																																																			.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	S	V	R	I	I	E	A	A	L	R	L	Y	X	K	K	P	P	H	E	V	S	I	E	E	I	A	R	E	A	K	V	S	K	S	L	I	F	Y	H	F	E	S	K	Q	K	L	L	E	E	A	V	X	H	A	F	R	K	X	X	E	E	F	N	P	.	.	.	.	.	.	.	.	.	.	R	S	V	E	E
Template Known Secondary structure																	S		G	G	G											T	S										S	S																			T				.	.	.	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.											.	70	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	F	A	A	I	A	N	C	F	T	S	K	D	T	P	A	G	C	F	M	I	N	N	C	T	T	L	S	P	D	S	G	D	I	A	N	T	L	K	S	R	H	A	M	Q	E	R	T	L	Q	Q	F	L	C	Q	R	Q	A	R	G	E	I	P	P	H	C	D	V	T	H	L	A	E	F	L	N	C	I	I	Q
Query Conservation
Alig confidence																														.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Template Sequence		V	V	D	Y	G	I	G	F	I	A	E	R	R	E	F	I	E	F	X	X	Y	A	L	S	Q	V	R	I	.	.	.	.	.	.	.	E	E	L	E	R	X	F	G	E	A	L	E	K	V	A	S	L	F	E	.	.	.	.	.	.	.	.	.	G	C	R	H	P	R	E	T	A	I	A	L	X	A	X	L	D
Template Known Secondary structure											T	S														T	S			.	.	.	.	.	.	.																		T	T	.	.	.	.	.	.	.	.	.	T	S	S	S
Template Predicted Secondary structure																														.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.								.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120										.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		180	.	.	.	.	.	.			.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		G	M	S	I	S	A	R	.	.	E	G	A	S	L	E	K	L	M	Q	I	A	G	T	T	L
Query Conservation									.	.
Alig confidence									.	.
Template Conservation
Template Sequence		G	L	S	I	Y	S	L	Y	F	D	L	G	K	L	E	K	Y	R	E	I	A	X	E	F	V
Template Known Secondary structure								T	T	S
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions